Gene
| Gene Model ID | pfu_aug1.0_170017.1_71963 |
|---|---|
| Locus | scaffold170017.1 : 1 ... 859 : + |
| To GenomeBrowser | scaffold170017.1:1..859 |
| Genes list of scaffold | scaffold170017.1 |
| Synonym | NA |
Manual annotation
| Study field | Reproduction |
|---|---|
| Gene name | C1q domain containing protein |
| Description | Best hit to FR715620 (MgC1q41). 137 bits, 7e-31 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_170017.1_71963.t1 | 1 | 1 | C1q | 8 | 130 | 2.0e-25 | 89.2 | 1.5e-29 | 2.2e-25 | 89.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_170017.1_71963.t1 | gi|325504381|emb|CBX41690.1| | putative C1q domain containing protein MgC1q41 [Mytilus galloprovincialis] | 6.0e-31 |
Transcript
| Transcript ID | pfu_aug1.0_170017.1_71963.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_170017.1_71963.t1 gttcatcgactgatgaggaagtagccttctccgtaggattaactcatacaatgtctggaaccaagctaattttctacaga atttttatcaacatcgggaatggataccatgaaactactggtgtattcaacgctccaaagagcggaatctatgtatttta ttattatgctctctctacacagaataaggtaatatatgtcgatctgtaccataattaccattatgtcaattcgttatatg gccatattagcaatggatacgcaaacggaggcaatgctgctacgctagaactgatgagtggggacaccgtctacattaaa gttcgagatacaaactctgaattctatggctcatcggacgaaatatattgtaccttttctggacattttgtcagcccatc gtttaaattccatccgggtcccatcggataa |
|
Protein
| Protein ID | pfu_aug1.0_170017.1_71963.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_170017.1_71963.t1 SSTDEEVAFSVGLTHTMSGTKLIFYRIFINIGNGYHETTGVFNAPKSGIYVFYYYALSTQNKVIYVDLYHNYHYVNSLYG HISNGYANGGNAATLELMSGDTVYIKVRDTNSEFYGSSDEIYCTFSGHFVSPSFKFHPGPIG |
|