Gene
Gene Model ID | pfu_aug1.0_170017.1_71963 |
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Locus | scaffold170017.1 : 1 ... 859 : + |
To GenomeBrowser | scaffold170017.1:1..859 |
Genes list of scaffold | scaffold170017.1 |
Synonym | NA |
Manual annotation
Study field | Reproduction |
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Gene name | C1q domain containing protein |
Description | Best hit to FR715620 (MgC1q41). 137 bits, 7e-31 |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_170017.1_71963.t1 | 1 | 1 | C1q | 8 | 130 | 2.0e-25 | 89.2 | 1.5e-29 | 2.2e-25 | 89.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_170017.1_71963.t1 | gi|325504381|emb|CBX41690.1| | putative C1q domain containing protein MgC1q41 [Mytilus galloprovincialis] | 6.0e-31 |
Transcript
Transcript ID | pfu_aug1.0_170017.1_71963.t1 |
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Definition | - |
>pfu_aug1.0_170017.1_71963.t1 gttcatcgactgatgaggaagtagccttctccgtaggattaactcatacaatgtctggaaccaagctaattttctacaga atttttatcaacatcgggaatggataccatgaaactactggtgtattcaacgctccaaagagcggaatctatgtatttta ttattatgctctctctacacagaataaggtaatatatgtcgatctgtaccataattaccattatgtcaattcgttatatg gccatattagcaatggatacgcaaacggaggcaatgctgctacgctagaactgatgagtggggacaccgtctacattaaa gttcgagatacaaactctgaattctatggctcatcggacgaaatatattgtaccttttctggacattttgtcagcccatc gtttaaattccatccgggtcccatcggataa |
Protein
Protein ID | pfu_aug1.0_170017.1_71963.t1 |
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Definition | - |
>pfu_aug1.0_170017.1_71963.t1 SSTDEEVAFSVGLTHTMSGTKLIFYRIFINIGNGYHETTGVFNAPKSGIYVFYYYALSTQNKVIYVDLYHNYHYVNSLYG HISNGYANGGNAATLELMSGDTVYIKVRDTNSEFYGSSDEIYCTFSGHFVSPSFKFHPGPIG |