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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_17050.1_32762
Locus scaffold17050.1 : 216 ... 16644 : +
To GenomeBrowser scaffold17050.1:216..16644
Genes list of scaffold scaffold17050.1
Synonym pfu_aug2.0_879.1_31241

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_17050.1_32762.t1 1 1 HRM 56 97 2.5e-10 40.2 1.3e-13 9.7e-10 38.3

Transcript
Transcript IDpfu_aug1.0_17050.1_32762.t1
Definition-
>pfu_aug1.0_17050.1_32762.t1
atgagccgaagtgcaatcaaactcaaacaacaacgaattcttcttttccggtgtgtgccgagtaggccatatcaatatgg
acgtcataggaacaactcttttagggttgtcaccgtggcgttgcggtatgagcgatctgctttgtatgctaggcgaagcc
gccgttcctactgtttccccacatgggatcggattgcatgttggccttacaccaaggccggtgagagatggagtataccg
tgtccagactatatcaatggatttgacactgatgaacgttcgtcttctaatacatatatcaaaagcagtgaaagtgcatc
taacattttaagcaagcataacaatgaactgtcttcattcaatatctctatttctaaattggatctcccaacactatatt
gcataccgaaactgcacaagtctccttacaaatttcgatttattgctaattctagtaactgctccactacaattttgtct
aaaaatctgacgtcagcacttactgctattaaagaacacataactagatattgtgaaacggttctaaacaggaacgatgt
taatttattttggtctattaagaattcaggggatgtgattgacaaaatgaaatctggaaatttccaagccaatacgattt
cttcatacgacttctctaatatgtacaccacacttcctcatgacaaaattaatgatggatcatctaatctcattaaatgg
tgttttgatcgagagtggaaaacttacatttgtacatctgaatcgaagggtttcttttcctcgacagactacaaatcata
caaatcatggacatgtagtgacctgtgtaatgcctcttggacaatatttatgttagatttggagcacctaggatctataa
gtctgatgttcaatataggatacggagtatcactggtgtccctggttttggccaccttcataatgcttttcttcagcgtc
atctatagctttcgttgttccttgggcaatagtccgagctaccttggaaaacgtatacttaattttgcaatattcatcaa
catcattagagtcttatttaccaagctgaatgcatttaacgccagagaaactaaaaaattcaggtacaagtaa

Protein
Protein IDpfu_aug1.0_17050.1_32762.t1
Definition-
>pfu_aug1.0_17050.1_32762.t1
MSRSAIKLKQQRILLFRCVPSRPYQYGRHRNNSFRVVTVALRYERSALYARRSRRSYCFPTWDRIACWPYTKAGERWSIP
CPDYINGFDTDERSSSNTYIKSSESASNILSKHNNELSSFNISISKLDLPTLYCIPKLHKSPYKFRFIANSSNCSTTILS
KNLTSALTAIKEHITRYCETVLNRNDVNLFWSIKNSGDVIDKMKSGNFQANTISSYDFSNMYTTLPHDKINDGSSNLIKW
CFDREWKTYICTSESKGFFSSTDYKSYKSWTCSDLCNASWTIFMLDLEHLGSISLMFNIGYGVSLVSLVLATFIMLFFSV
IYSFRCSLGNSPSYLGKRILNFAIFINIIRVLFTKLNAFNARETKKFRYK

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