Gene
| Gene Model ID | pfu_aug1.0_1706.1_08072 |
|---|---|
| Locus | scaffold1706.1 : 5302 ... 14445 : - |
| To GenomeBrowser | scaffold1706.1:5302..14445 |
| Genes list of scaffold | scaffold1706.1 |
| Synonym | pfu_aug2.0_32.1_06801 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1706.1_08072.t1 | 1 | 1 | Reeler | 35 | 165 | 5.6e-13 | 49.2 | 5.3e-17 | 7.9e-13 | 48.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1706.1_08072.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1706.1_08072.t1 atgtatcattacaaggaacggttgctggttgtccactttcttctttgtcaagttgctgtagtaacggtagctgtttatcc tttcgattattcagaacgtgagtgtaaagatatgtttcctgaggaacttgatgaggacgctatcatacatgggcataata tgccttttgaagttgaacctcaggattcaatttttactgatggaggaatcaaagtaacagtacgagcaaaaggtgacgat aacataaaaggtatttttctacaagcacgggctgcggacggcaaatgtgacatcgaacccttaggattctttgatcccaa aactgaaacatatctaaagactgtgaaatgtgaacatgcgatgagtacaataacaaatgctgagtggggtactggaaaaa aggaagtcgaatttgaatggcgacctaaatttggtgaagcaagaaatgtcttttttgtagcaacaattgtaacaggtcca aaagttttctatacaggagtgaccagtcacgtggttcggtctgtgaacggacaaagttctctccatacacacggtgacca ttactcgatttgtacgttcaggagaaaattaaagacagaagatccagcaagtcttatcgggaatggtataaatcgtcatg tgatacactttactgtctttatattaagcagtttgtcagcgagactgttgaattag |
|
Protein
| Protein ID | pfu_aug1.0_1706.1_08072.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1706.1_08072.t1 MYHYKERLLVVHFLLCQVAVVTVAVYPFDYSERECKDMFPEELDEDAIIHGHNMPFEVEPQDSIFTDGGIKVTVRAKGDD NIKGIFLQARAADGKCDIEPLGFFDPKTETYLKTVKCEHAMSTITNAEWGTGKKEVEFEWRPKFGEARNVFFVATIVTGP KVFYTGVTSHVVRSVNGQSSLHTHGDHYSICTFRRKLKTEDPASLIGNGINRHVIHFTVFILSSLSARLLN |
|