Gene
| Gene Model ID | pfu_aug1.0_1706.1_08075 |
|---|---|
| Locus | scaffold1706.1 : 58196 ... 64905 : - |
| To GenomeBrowser | scaffold1706.1:58196..64905 |
| Genes list of scaffold | scaffold1706.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1706.1_08075.t1 | 2 | 1 | zf-B_box | 5 | 53 | 5.3e-10 | 39.0 | 1.6e-08 | 9.6e-06 | 25.3 |
| pfu_aug1.0_1706.1_08075.t1 | 2 | 2 | zf-B_box | 67 | 113 | 5.3e-10 | 39.0 | 1.3e-06 | 0.00083 | 19.1 |
| pfu_aug1.0_1706.1_08075.t1 | 1 | 1 | fn3 | 156 | 236 | 1.7e-09 | 37.6 | 5.7e-12 | 3.5e-09 | 36.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1706.1_08075.t1 | gi|348543045|ref|XP_003458994.1| | PREDICTED: uncharacterized protein LOC100702146 isoform X1 [Oreochromis niloticus] | 1.0e-18 |
Transcript
| Transcript ID | pfu_aug1.0_1706.1_08075.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1706.1_08075.t1 atgaaaagagagcagaaggtcaaatgcgacacttgtaaggccttgggaagcgataccgatgctacatcattttgcaatga ttgcgatgaatatctatgcattaaatgtactcgacatcaccaagctatgaaactgaccaaggaccacaaattggtttctg cagaggagaaacgtgacggtttgcatggagaggaagcatttaattgtgagccttgtgaaagtctcgaagaaagcgtacag gcaactgcatactgcaaggactgcaatgaacatctttgcgatggttgccaaaaaagacacaaggcaatgaaattgacaaa aactcatatagtgataacgatagagcagtttctagagatgagaaagtctggaaatactgttttgaacgatcttagcaagg agaacggggaggcaggaattgaaaaagattcatctcaaaaggaagagacaaagttagatcaaactcctggaaagcctgtt gcacgaaaagtaaaatctgacagtataaccctttcatggagacttccaaatgacttccaagagggtgactactatcaaat ccgttttaaaaatattgatggaggaaaatggcgtttttacgaggaacaaccatcagagggaaccatagttatgacaaaaa tgaaagctaacacaaaatttgtgttccaagtcagagtggtccatgatgatatggagggcccatatagtcccgtcagtgac gaggtgcacaccaaattatcaccggcaaataggctttttaattactcaactttgacacgaaaaggaactcctgaccttta tcgattaccattgaccgagaacaaaaatgcaagaaacagtggagtaaaaactagaaaatttgatcttggagcacccccga aaagaggaaaagagaaaaccatcatgcttgttggggctacaggaaccggtaaaagcacacttgtagatggtttagtcaac tacgtgttaggagtcaactgggacgatagttttcgatacacccttgttgatctagaaaaagaggagagatccaaacagca caaccagcatttcagaacaattataatacaacagattcgccatccttatcataggaacttcatgtacacattggaatatg caaattgctttgctcaatataaaaaaaacacttctgtacggattatgaaaatagatctgcagttcgccgtcggttttgac tttcctgtgtag |
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Protein
| Protein ID | pfu_aug1.0_1706.1_08075.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1706.1_08075.t1 MKREQKVKCDTCKALGSDTDATSFCNDCDEYLCIKCTRHHQAMKLTKDHKLVSAEEKRDGLHGEEAFNCEPCESLEESVQ ATAYCKDCNEHLCDGCQKRHKAMKLTKTHIVITIEQFLEMRKSGNTVLNDLSKENGEAGIEKDSSQKEETKLDQTPGKPV ARKVKSDSITLSWRLPNDFQEGDYYQIRFKNIDGGKWRFYEEQPSEGTIVMTKMKANTKFVFQVRVVHDDMEGPYSPVSD EVHTKLSPANRLFNYSTLTRKGTPDLYRLPLTENKNARNSGVKTRKFDLGAPPKRGKEKTIMLVGATGTGKSTLVDGLVN YVLGVNWDDSFRYTLVDLEKEERSKQHNQHFRTIIIQQIRHPYHRNFMYTLEYANCFAQYKKNTSVRIMKIDLQFAVGFD FPV |
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