Gene
| Gene Model ID | pfu_aug1.0_17077.1_61679 |
|---|---|
| Locus | scaffold17077.1 : 746 ... 9048 : + |
| To GenomeBrowser | scaffold17077.1:746..9048 |
| Genes list of scaffold | scaffold17077.1 |
| Synonym | pfu_aug2.0_314.1_13982 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_17077.1_61679.t1 | 1 | 1 | Neur_chan_LBD | 21 | 215 | 1.3999e-42 | 145.3 | 0.0 | 1.99965e-42 | 144.7 |
| pfu_aug1.0_17077.1_61679.t1 | 2 | 1 | Neur_chan_memb | 222 | 308 | 1.1e-13 | 51.5 | 2.6e-17 | 1.9e-13 | 50.8 |
| pfu_aug1.0_17077.1_61679.t1 | 2 | 2 | Neur_chan_memb | 358 | 398 | 1.1e-13 | 51.5 | 0.0053 | 39.0 | 4.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_17077.1_61679.t1 | gi|281351511|gb|EFB27095.1| | hypothetical protein PANDA_006853, partial [Ailuropoda melanoleuca] | 1.4013e-45 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_17077.1_61679.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17077.1_61679.t1 atggagactttatcggaaccgacgaaaactgattacgagaatgttgtgagagaaatatttaccacaaataattataacaa aaagatcctaccgaggaatgggacggaacctgtttttcttgatttaagtttttatttcctcggaataaatgaaattgacg aggtgaaagagaagatggtcaccactggttacttggtcatttcgtggctggacagtggtctgaaatgggaccaggccgct cacaacgacttagaggagatttttgtcccccaagacgacatttggaaaccggacatatttctacaaaatggattcaagaa attttcggaactcggtggttcttactactatattcaagtgtactccaatggatacacagagtggatgccgttcgaggtat tcgaaagtaggtgctccgtcgatacgagtaattacccgtttgacaaacaaaactgcagcatctctttcgtcgtctggagc tattctgttgcagaggttgaaatcgagaaaagcaaacaaggcataatatatgacgaacaattccaagaaaacagcgtctg ggacattttatccgtgtcctacgatgtcagcaaagagacgagagagtctaaaattacattttccttcaatttgagaagaa aaccactctactatgttgtaaatataatacttccggttatatttcttggatttctcagcggacttgtatttgttattcca gctgacacaggagagaaatcaggttattccgtgacagtctttcttgctttggcagtttttctgactatcataagcgcgct acttccggtgaactctgaaaaagtttccattctaggaatttatctgctcatgcaggtgatctcaggtgttgttgtcctta tgatatcaactttccagctcaggttaaatttcagaggtccatcatatccggtgaccggtattttcctgaaaataaccaaa ttccaaaggaggctttgttgttgctgtcatagcgcgggaaattcaaatcgtgttgagaacctgaatactactattctgcc aaaaacggagaagcaaaatccggagaatatggagaaggacgttaatgtagaagactctgaacctgtgagttggagcgatg tggtatctgcaatagattttctgggattcatatcattcaatatcatctatattttgttgacagtttctgtgttccttatt ttgagcctttaa |
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Protein
| Protein ID | pfu_aug1.0_17077.1_61679.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17077.1_61679.t1 METLSEPTKTDYENVVREIFTTNNYNKKILPRNGTEPVFLDLSFYFLGINEIDEVKEKMVTTGYLVISWLDSGLKWDQAA HNDLEEIFVPQDDIWKPDIFLQNGFKKFSELGGSYYYIQVYSNGYTEWMPFEVFESRCSVDTSNYPFDKQNCSISFVVWS YSVAEVEIEKSKQGIIYDEQFQENSVWDILSVSYDVSKETRESKITFSFNLRRKPLYYVVNIILPVIFLGFLSGLVFVIP ADTGEKSGYSVTVFLALAVFLTIISALLPVNSEKVSILGIYLLMQVISGVVVLMISTFQLRLNFRGPSYPVTGIFLKITK FQRRLCCCCHSAGNSNRVENLNTTILPKTEKQNPENMEKDVNVEDSEPVSWSDVVSAIDFLGFISFNIIYILLTVSVFLI LSL |
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