Gene
| Gene Model ID | pfu_aug1.0_17138.1_11010 |
|---|---|
| Locus | scaffold17138.1 : 41 ... 3897 : + |
| To GenomeBrowser | scaffold17138.1:41..3897 |
| Genes list of scaffold | scaffold17138.1 |
| Synonym | pfu_aug2.0_845.1_17886 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_17138.1_11010.t1 | 1 | 1 | F_actin_bind | 178 | 286 | 3.9e-21 | 74.8 | 4.3e-25 | 6.4e-21 | 74.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_17138.1_11010.t1 | gi|241074627|ref|XP_002408730.1| | hypothetical protein IscW_ISCW000294 [Ixodes scapularis] | 9.0e-13 |
Transcript
| Transcript ID | pfu_aug1.0_17138.1_11010.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17138.1_11010.t1 atgtttaagtccgtacagggtcatatagacttcagtttaggtagtaatgacaatactggggttggaaatgaagatggctt tacggattatagaaataaatctgattacaaagctcccgctagacctcctttcacacataaaataagatctgcatcaacgg gtgattttcctggaagggatgaagggcctcaagatggaatgttctcttctccacaggataataacaaacagagtgcctca gtgctttcaaaagtggccatgttccaatctgctggaccagaatttgggtctttcaaaccgtttgtgcgcggtgaaaatga gcgtagctctttgcgagacgatcgcagcacaggatatgacgttgtacgaggcgcaactcgagaggaagttatttataaac ctgttttaccaaaagcatcagcaagtgccagtatgtcaagtgtgatgcagtcatctttaatgtcaaaatctatgatggat tctttagaaccagtccctgaaacgtattgtcacggtcagaattccgattccgacacgccgcaagttacgcgtgaaactat ttttagcacgtctgctgacctgctgtcttgtattgaatcattaacaacagcaggaaacaaaactagtacaaattttatgg tgttgtctgataatattttgcattttcatgagctgtgctcaaattttattgacactttgccccctcatgcaaaattccag gctaaagagttgttatccaggttacaaactcacagtgaaagtgtaaagactttctgtagcacaaatcctgccagtggagc gaaaattattaacgatgtgaaagccactgttcaagaagtcattgatctgattaagaggtga |
|
Protein
| Protein ID | pfu_aug1.0_17138.1_11010.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17138.1_11010.t1 MFKSVQGHIDFSLGSNDNTGVGNEDGFTDYRNKSDYKAPARPPFTHKIRSASTGDFPGRDEGPQDGMFSSPQDNNKQSAS VLSKVAMFQSAGPEFGSFKPFVRGENERSSLRDDRSTGYDVVRGATREEVIYKPVLPKASASASMSSVMQSSLMSKSMMD SLEPVPETYCHGQNSDSDTPQVTRETIFSTSADLLSCIESLTTAGNKTSTNFMVLSDNILHFHELCSNFIDTLPPHAKFQ AKELLSRLQTHSESVKTFCSTNPASGAKIINDVKATVQEVIDLIKR |
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