Gene
Gene Model ID | pfu_aug1.0_1714.1_08083 |
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Locus | scaffold1714.1 : 11262 ... 20055 : - |
To GenomeBrowser | scaffold1714.1:11262..20055 |
Genes list of scaffold | scaffold1714.1 |
Synonym | pfu_aug2.0_31.1_03469 |
Manual annotation
Study field | structural proteins |
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Gene name | myosin light chain kinase |
Description | Myosin light chain kinase partial sequence. BLASTP top hit to DS843990 (Ixodes scapularis). This gene might be a kinase domain of titin or twitchin, which is similar to the catalytic subunit of myosin light chain kinase. |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_1714.1_08083.t1 | 1 | 1 | Pkinase | 2 | 241 | 0.0 | 213.9 | 0.0 | 0.0 | 213.7 |
pfu_aug1.0_1714.1_08083.t1 | 1 | 1 | Pkinase_Tyr | 7 | 237 | 2.6e-34 | 118.4 | 8.4e-38 | 3.1e-34 | 118.2 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_1714.1_08083.t1 | gi|241638790|ref|XP_002410770.1| | Ser/Thr protein kinase, putative [Ixodes scapularis] | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_1714.1_08083.t1 |
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Definition | - |
>pfu_aug1.0_1714.1_08083.t1 atgaaatgtaaagaaaggaagactggtcgtctgctagctgctaaattcatagaagtgagtggaccgcaagagaaaagtga cgtcatcaatgaggtagaaatcatgaagtgccttcaacatcccagactccttcaactatatgacgcctttgaaaagaagg acagattctgtatagtgacagaattaatatctggaggagaactctttgaaagagtaataaacgatgattacatattgaca gaaaaagcctgtatcatgtttatgcgccagatctgtgaaggaatcgactacatgcactccaggaatattcttcaccttga tatgaagccagaaaatattctgtgtttgacacgcgaaggaaatattatcaaaatcatagactttgggcttgctagaaaat tttctcccggtggagatttacggatattattcggaactccagaatttatggcacctgaagttgtgaactttgaccctgca tcttttgcaacagatatgtggagtttaggagtcatttgttatgtattattgtccggcctgtcgccatttttgggtgaaaa cgaggctgaaactcttgtgaatgtgacgtctgctaaatgggactttaaagccgaggaatttgacagcatatcaaccgaag cgaaagatttcatttccaaactcctcataaaggacccaaggaaaagaatgaattgtaaggaatgccttgaacaccaatgg ttacgcaggtcacagaaaagggaagccaaactggatagatcattatctacaaaacgattgaagaagtttgttttccgaag aaagtggcagaaagcagtaaatgcaatgttagcattaaaaaggatgggtgtaaatcttacatag |
Protein
Protein ID | pfu_aug1.0_1714.1_08083.t1 |
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Definition | - |
>pfu_aug1.0_1714.1_08083.t1 MKCKERKTGRLLAAKFIEVSGPQEKSDVINEVEIMKCLQHPRLLQLYDAFEKKDRFCIVTELISGGELFERVINDDYILT EKACIMFMRQICEGIDYMHSRNILHLDMKPENILCLTREGNIIKIIDFGLARKFSPGGDLRILFGTPEFMAPEVVNFDPA SFATDMWSLGVICYVLLSGLSPFLGENEAETLVNVTSAKWDFKAEEFDSISTEAKDFISKLLIKDPRKRMNCKECLEHQW LRRSQKREAKLDRSLSTKRLKKFVFRRKWQKAVNAMLALKRMGVNLT |