Gene
| Gene Model ID | pfu_aug1.0_1714.1_08083 |
|---|---|
| Locus | scaffold1714.1 : 11262 ... 20055 : - |
| To GenomeBrowser | scaffold1714.1:11262..20055 |
| Genes list of scaffold | scaffold1714.1 |
| Synonym | pfu_aug2.0_31.1_03469 |
Manual annotation
| Study field | structural proteins |
|---|---|
| Gene name | myosin light chain kinase |
| Description | Myosin light chain kinase partial sequence. BLASTP top hit to DS843990 (Ixodes scapularis). This gene might be a kinase domain of titin or twitchin, which is similar to the catalytic subunit of myosin light chain kinase. |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1714.1_08083.t1 | 1 | 1 | Pkinase | 2 | 241 | 0.0 | 213.9 | 0.0 | 0.0 | 213.7 |
| pfu_aug1.0_1714.1_08083.t1 | 1 | 1 | Pkinase_Tyr | 7 | 237 | 2.6e-34 | 118.4 | 8.4e-38 | 3.1e-34 | 118.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1714.1_08083.t1 | gi|241638790|ref|XP_002410770.1| | Ser/Thr protein kinase, putative [Ixodes scapularis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_1714.1_08083.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1714.1_08083.t1 atgaaatgtaaagaaaggaagactggtcgtctgctagctgctaaattcatagaagtgagtggaccgcaagagaaaagtga cgtcatcaatgaggtagaaatcatgaagtgccttcaacatcccagactccttcaactatatgacgcctttgaaaagaagg acagattctgtatagtgacagaattaatatctggaggagaactctttgaaagagtaataaacgatgattacatattgaca gaaaaagcctgtatcatgtttatgcgccagatctgtgaaggaatcgactacatgcactccaggaatattcttcaccttga tatgaagccagaaaatattctgtgtttgacacgcgaaggaaatattatcaaaatcatagactttgggcttgctagaaaat tttctcccggtggagatttacggatattattcggaactccagaatttatggcacctgaagttgtgaactttgaccctgca tcttttgcaacagatatgtggagtttaggagtcatttgttatgtattattgtccggcctgtcgccatttttgggtgaaaa cgaggctgaaactcttgtgaatgtgacgtctgctaaatgggactttaaagccgaggaatttgacagcatatcaaccgaag cgaaagatttcatttccaaactcctcataaaggacccaaggaaaagaatgaattgtaaggaatgccttgaacaccaatgg ttacgcaggtcacagaaaagggaagccaaactggatagatcattatctacaaaacgattgaagaagtttgttttccgaag aaagtggcagaaagcagtaaatgcaatgttagcattaaaaaggatgggtgtaaatcttacatag |
|
Protein
| Protein ID | pfu_aug1.0_1714.1_08083.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1714.1_08083.t1 MKCKERKTGRLLAAKFIEVSGPQEKSDVINEVEIMKCLQHPRLLQLYDAFEKKDRFCIVTELISGGELFERVINDDYILT EKACIMFMRQICEGIDYMHSRNILHLDMKPENILCLTREGNIIKIIDFGLARKFSPGGDLRILFGTPEFMAPEVVNFDPA SFATDMWSLGVICYVLLSGLSPFLGENEAETLVNVTSAKWDFKAEEFDSISTEAKDFISKLLIKDPRKRMNCKECLEHQW LRRSQKREAKLDRSLSTKRLKKFVFRRKWQKAVNAMLALKRMGVNLT |
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