Gene
| Gene Model ID | pfu_aug1.0_17159.1_32776 |
|---|---|
| Locus | scaffold17159.1 : 7526 ... 19334 : + |
| To GenomeBrowser | scaffold17159.1:7526..19334 |
| Genes list of scaffold | scaffold17159.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_17159.1_32776.t1 | 2 | 1 | Beta-lactamase | 50 | 277 | 1.99993e-41 | 142.1 | 1.99993e-41 | 1.5e-37 | 129.4 |
| pfu_aug1.0_17159.1_32776.t1 | 2 | 2 | Beta-lactamase | 281 | 318 | 1.99993e-41 | 142.1 | 2.5e-05 | 0.19 | 10.7 |
| pfu_aug1.0_17159.1_32776.t1 | 1 | 1 | DUF3471 | 372 | 456 | 6.6e-06 | 25.8 | 1.9e-09 | 1.4e-05 | 24.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_17159.1_32776.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17159.1_32776.t1 atgaatgcaggaaaatatctgggatatattcatatttgcattatatcgttagccgcaattttggtcattgtgtcctgtga tcagaatagagacgtagactttgacaaaaaactaaaggattttgaagaatatctagaagaagtggtcagatgtaggaaag tgaccagtggtgctataacgctggtcaaagatgaccgcgtggtgctggctcgaggattcggacacactgaccaagagaaa cggactccggccaccaatgctacacggttttgcatcggatcgttgaccaaggccttcacgagttccattatagccaaagt tctaagtgaacaccagagctttacatgggacacccccattacggacatattaaacgattttcagtttgacgatgagctgc gtagtaagtacaccaacttacgtgatttattggcacacaggctcggctatccctccaacttccttgctctattagtgggc tttccagaaaatacgaccagaaaagattttgtaagaatgttacaacaccaagtgcctcaagttggatttcgtacaaattt cctgtatagcaactacatgtacacattagcaggttacttggccgaacatgtcaccggtcagtcttgggaacagatggtca gcgattacctgttaaggcctctggatatgtccaccagtggtttcgtgaacaccataaagaatttcagcaagttctctcct tcgttctcatttgtggacggaaaagcatttgcaaatgagtttgatcttttatatgcggttgacccatctggtccggccgg atctatctacacaacagcagacgacatgggatacaagaaattgtggcattcaggagggatagtcaactactcttcgcttt tgtggctgtttcctgataagaatgttggtgtctacgtcacgattacaggagccgagggcaatcggaaaggtccagcaatt ttccctataacgagtcgagctgctgatatcctactcggcgaagaaccttggctgaacaaaacgacaggatgttcatatcc agatccttggagcgaaacgaaagaaattgtaagagcgaataatacattgcacaaatatgcttggaatattacccgaaatg catcagattacgcggggatttattcaaacccagcctatgcagacatgactatcaaagtagagacgggtccaaaactaaaa ctctattttggaagattcggagtattttcactatatccgattacggaagaaaaatttgacgcatatctagagggacctct atcctatgttacgaattcagacgataatacagctccattccatttagaatttattgtagattcttctcaggtgacaaagc ttaagtttccgtttataccagcagacagcatagtcgaattagttaagaagaattccaaaaatcaagggagcagtgcaaat tctgttccaaatcttcattcaaatcgtttcatgaaatatgtatcaattattgatatgtttttcgtatttctatttcctgt gtttgtttcttttttcagctga |
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Protein
| Protein ID | pfu_aug1.0_17159.1_32776.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17159.1_32776.t1 MNAGKYLGYIHICIISLAAILVIVSCDQNRDVDFDKKLKDFEEYLEEVVRCRKVTSGAITLVKDDRVVLARGFGHTDQEK RTPATNATRFCIGSLTKAFTSSIIAKVLSEHQSFTWDTPITDILNDFQFDDELRSKYTNLRDLLAHRLGYPSNFLALLVG FPENTTRKDFVRMLQHQVPQVGFRTNFLYSNYMYTLAGYLAEHVTGQSWEQMVSDYLLRPLDMSTSGFVNTIKNFSKFSP SFSFVDGKAFANEFDLLYAVDPSGPAGSIYTTADDMGYKKLWHSGGIVNYSSLLWLFPDKNVGVYVTITGAEGNRKGPAI FPITSRAADILLGEEPWLNKTTGCSYPDPWSETKEIVRANNTLHKYAWNITRNASDYAGIYSNPAYADMTIKVETGPKLK LYFGRFGVFSLYPITEEKFDAYLEGPLSYVTNSDDNTAPFHLEFIVDSSQVTKLKFPFIPADSIVELVKKNSKNQGSSAN SVPNLHSNRFMKYVSIIDMFFVFLFPVFVSFFS |
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