Gene
| Gene Model ID | pfu_aug1.0_1719.1_44113 |
|---|---|
| Locus | scaffold1719.1 : 78143 ... 88225 : - |
| To GenomeBrowser | scaffold1719.1:78143..88225 |
| Genes list of scaffold | scaffold1719.1 |
| Synonym | pfu_aug2.0_1608.1_28405 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1719.1_44113.t1 | 1 | 1 | CASP_C | 16 | 169 | 8.3e-33 | 113.4 | 7.4e-36 | 9.9e-33 | 113.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1719.1_44113.t1 | gi|156347581|ref|XP_001621680.1| | hypothetical protein NEMVEDRAFT_v1g40279 [Nematostella vectensis] | 7.0e-34 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1719.1_44113.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1719.1_44113.t1 atggtacgtccccaggagcggtcatttatttttcacgaaaagtaccacaagctacaagacgaatacaaggacaccgcgag cactgtacaggagcagaagttactcatcacgcaactagaggaagacctgcgcagtgtgaatgcgttgtcgtccatgttcc ggggcgaggccgaggggggagaacccgtcaaacccctggggtcgggcgaggcggggcttgtttctgaggcagtgaaggac gtcatgtcaccaacctcaccaggcgtagataagacagctgtagattctatcttgcccattgtgcaaagtcagcgtgagcg gtacaggatcagggctcaggaactagaagcgcattcactaggtcaacaacagcaaatctccttactacagaacgaaatag acaaactacgatctgacaatgtcaaaatgtacgaaaagatccgattcctgcagagctacccaaagaaggttctatacaaa cttgcctatacacagaccagtaagagggactttgccgcagaatgtcatgaaaagtcatctttagatttacactactcata ttgtttcactatcttcgtgcactga |
|
Protein
| Protein ID | pfu_aug1.0_1719.1_44113.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1719.1_44113.t1 MVRPQERSFIFHEKYHKLQDEYKDTASTVQEQKLLITQLEEDLRSVNALSSMFRGEAEGGEPVKPLGSGEAGLVSEAVKD VMSPTSPGVDKTAVDSILPIVQSQRERYRIRAQELEAHSLGQQQQISLLQNEIDKLRSDNVKMYEKIRFLQSYPKKVLYK LAYTQTSKRDFAAECHEKSSLDLHYSYCFTIFVH |
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