Gene
| Gene Model ID | pfu_aug1.0_17210.1_54381 |
|---|---|
| Locus | scaffold17210.1 : 141 ... 8423 : + |
| To GenomeBrowser | scaffold17210.1:141..8423 |
| Genes list of scaffold | scaffold17210.1 |
| Synonym | pfu_aug2.0_1420.1_01620 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_17210.1_54381.t1 | 2 | 1 | Ank_2 | 101 | 177 | 5.7e-18 | 65.0 | 9.0e-20 | 8.9e-17 | 61.2 |
| pfu_aug1.0_17210.1_54381.t1 | 2 | 1 | Ank_5 | 103 | 154 | 3.3e-14 | 52.5 | 1.1e-11 | 1.1e-08 | 34.9 |
| pfu_aug1.0_17210.1_54381.t1 | 4 | 1 | Ank_4 | 106 | 134 | 7.4e-19 | 67.7 | 3.8e-06 | 0.0038 | 17.7 |
| pfu_aug1.0_17210.1_54381.t1 | 3 | 1 | Ank | 114 | 145 | 6.1e-17 | 60.4 | 9.5e-10 | 9.4e-07 | 28.3 |
| pfu_aug1.0_17210.1_54381.t1 | 2 | 1 | Ank_3 | 114 | 142 | 1.9e-13 | 49.2 | 1.6e-07 | 0.00016 | 21.5 |
| pfu_aug1.0_17210.1_54381.t1 | 4 | 2 | Ank_4 | 116 | 159 | 7.4e-19 | 67.7 | 2.5e-13 | 2.5e-10 | 40.5 |
| pfu_aug1.0_17210.1_54381.t1 | 2 | 2 | Ank_5 | 146 | 187 | 3.3e-14 | 52.5 | 4.4e-08 | 4.3e-05 | 23.6 |
| pfu_aug1.0_17210.1_54381.t1 | 3 | 2 | Ank | 147 | 177 | 6.1e-17 | 60.4 | 1.8e-09 | 1.8e-06 | 27.4 |
| pfu_aug1.0_17210.1_54381.t1 | 2 | 2 | Ank_3 | 147 | 173 | 1.9e-13 | 49.2 | 4.3e-08 | 4.2e-05 | 23.3 |
| pfu_aug1.0_17210.1_54381.t1 | 4 | 3 | Ank_4 | 151 | 187 | 7.4e-19 | 67.7 | 5.2e-08 | 5.2e-05 | 23.6 |
| pfu_aug1.0_17210.1_54381.t1 | 1 | 1 | Myosin_head | 294 | 406 | 8.1e-38 | 129.9 | 1.4e-40 | 1.4e-37 | 129.1 |
| pfu_aug1.0_17210.1_54381.t1 | 4 | 4 | Ank_4 | 336 | 352 | 7.4e-19 | 67.7 | 0.31 | 310.0 | 2.0 |
| pfu_aug1.0_17210.1_54381.t1 | 2 | 2 | Ank_2 | 336 | 352 | 5.7e-18 | 65.0 | 0.75 | 740.0 | 0.5 |
| pfu_aug1.0_17210.1_54381.t1 | 3 | 3 | Ank | 336 | 351 | 6.1e-17 | 60.4 | 0.58 | 570.0 | 0.6 |
Transcript
| Transcript ID | pfu_aug1.0_17210.1_54381.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17210.1_54381.t1 atggatcagtcagtgttggatgtgcttcccctggcacagaggcaaaaggtgacccggcagctcagacagaagcaggtaga gggttacctggcctttataaagaccgagggcggaggacaaggcagcttcaagaagccccgaaaggcaaacaagaaaggca ctgctgtcaacttcacgaccgacttcctgttacaagacgctgtggagaattttgacgatagagaaggcattgaccaaaag aagcacaaggagctacagttatctataccaagacagatgtaccaagatgtccagaaccacgttagtaccgggggtaacgt caacaagacatcagagtccgggatatcattgatacacatagcctgtgccaatggatatcgtaaagttttacgattactga taaagaacggagcagacgtcaataccacagatgacttgggttggactcctctacacgtggcagctagattcagtcagatg aagaccgttcagtccttactgaagagtggtgccgaccctctcctgaagaatgtaaataacgacaccccgttgtccgtagc tacggctgacgatgttaagacccttttactgaaagccgagagaaagaaacagaaacaggtggcatggagggcgtcggaac tggtagtagatgacgaggaagacgatgaggaagatgacggattgactgctggtaacttagtcaggatcaacagcaaaaca gtgcgtaacagacactcttcattagccaaagaggatgagattctagaggccaagaaaaggctgatttatgacacgcctga cttttccacagagaggagcacatcagaggaggattatgaagtaccagaggagcaggaggaggaagatatctatatctcag ctcgttatcacgctaaaggaaacacaaacttgccgccccacatatacagtacggcagattgggctcatcgctgcttgata cgggaacaggcctctcagtgctgcgttatatcgggagaaagtgggtcaggaaaaacagagtcatgtaaactcctggtgca gcatctggtttctgtagctggaagtgaggagagcaaccttaatcagaaaatttcacaggtgaatccagtgttagaggctt tcggcaatgccaggactgtgatgaacattaattctagtagatttgctaagtacatggagctcaactttaatactcatggg aaaataacaggaggtaccaagataacactgattgtactgttcaacttgaaagaagattga |
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Protein
| Protein ID | pfu_aug1.0_17210.1_54381.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17210.1_54381.t1 MDQSVLDVLPLAQRQKVTRQLRQKQVEGYLAFIKTEGGGQGSFKKPRKANKKGTAVNFTTDFLLQDAVENFDDREGIDQK KHKELQLSIPRQMYQDVQNHVSTGGNVNKTSESGISLIHIACANGYRKVLRLLIKNGADVNTTDDLGWTPLHVAARFSQM KTVQSLLKSGADPLLKNVNNDTPLSVATADDVKTLLLKAERKKQKQVAWRASELVVDDEEDDEEDDGLTAGNLVRINSKT VRNRHSSLAKEDEILEAKKRLIYDTPDFSTERSTSEEDYEVPEEQEEEDIYISARYHAKGNTNLPPHIYSTADWAHRCLI REQASQCCVISGESGSGKTESCKLLVQHLVSVAGSEESNLNQKISQVNPVLEAFGNARTVMNINSSRFAKYMELNFNTHG KITGGTKITLIVLFNLKED |
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