Gene
| Gene Model ID | pfu_aug1.0_17251.1_32785 |
|---|---|
| Locus | scaffold17251.1 : 1279 ... 21584 : - |
| To GenomeBrowser | scaffold17251.1:1279..21584 |
| Genes list of scaffold | scaffold17251.1 |
| Synonym | pfu_aug2.0_1032.1_08108 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_17251.1_32785.t1 | 4 | 1 | EF-hand_6 | 54 | 76 | 3.4e-21 | 73.1 | 0.0033 | 4.1 | 7.5 |
| pfu_aug1.0_17251.1_32785.t1 | 3 | 1 | EF-hand_7 | 58 | 74 | 5.7e-18 | 64.8 | 0.0019 | 2.3 | 8.3 |
| pfu_aug1.0_17251.1_32785.t1 | 4 | 1 | EF-hand_1 | 60 | 75 | 5.1e-24 | 81.7 | 0.0082 | 10.0 | 5.7 |
| pfu_aug1.0_17251.1_32785.t1 | 4 | 1 | EF-hand_5 | 60 | 73 | 3.1e-15 | 54.7 | 0.018 | 22.0 | 4.5 |
| pfu_aug1.0_17251.1_32785.t1 | 3 | 1 | EF-hand_8 | 64 | 104 | 9.4e-16 | 57.1 | 4.1e-07 | 0.00051 | 19.6 |
| pfu_aug1.0_17251.1_32785.t1 | 2 | 1 | EF-hand_4 | 80 | 117 | 3.3e-08 | 33.2 | 7.0e-07 | 0.00087 | 18.9 |
| pfu_aug1.0_17251.1_32785.t1 | 4 | 2 | EF-hand_1 | 83 | 106 | 5.1e-24 | 81.7 | 1.1e-09 | 1.3e-06 | 27.2 |
| pfu_aug1.0_17251.1_32785.t1 | 4 | 2 | EF-hand_6 | 83 | 104 | 3.4e-21 | 73.1 | 3.6e-08 | 4.5e-05 | 22.9 |
| pfu_aug1.0_17251.1_32785.t1 | 3 | 2 | EF-hand_7 | 83 | 143 | 5.7e-18 | 64.8 | 2.4e-11 | 2.9e-08 | 33.6 |
| pfu_aug1.0_17251.1_32785.t1 | 4 | 2 | EF-hand_5 | 83 | 103 | 3.1e-15 | 54.7 | 2.7e-07 | 0.00033 | 19.8 |
| pfu_aug1.0_17251.1_32785.t1 | 3 | 2 | EF-hand_8 | 116 | 143 | 9.4e-16 | 57.1 | 0.00067 | 0.83 | 9.3 |
| pfu_aug1.0_17251.1_32785.t1 | 4 | 3 | EF-hand_1 | 120 | 145 | 5.1e-24 | 81.7 | 7.3e-07 | 0.0009 | 18.3 |
| pfu_aug1.0_17251.1_32785.t1 | 4 | 3 | EF-hand_6 | 121 | 144 | 3.4e-21 | 73.1 | 7.2e-07 | 0.00089 | 18.9 |
| pfu_aug1.0_17251.1_32785.t1 | 3 | 3 | EF-hand_7 | 121 | 178 | 5.7e-18 | 64.8 | 3.1e-13 | 3.8e-10 | 39.7 |
| pfu_aug1.0_17251.1_32785.t1 | 4 | 3 | EF-hand_5 | 123 | 140 | 3.1e-15 | 54.7 | 0.052 | 64.0 | 3.1 |
| pfu_aug1.0_17251.1_32785.t1 | 2 | 2 | EF-hand_4 | 125 | 175 | 3.3e-08 | 33.2 | 6.6e-05 | 0.081 | 12.6 |
| pfu_aug1.0_17251.1_32785.t1 | 3 | 3 | EF-hand_8 | 132 | 179 | 9.4e-16 | 57.1 | 5.0e-13 | 6.2e-10 | 38.5 |
| pfu_aug1.0_17251.1_32785.t1 | 4 | 4 | EF-hand_1 | 155 | 178 | 5.1e-24 | 81.7 | 9.0e-11 | 1.1e-07 | 30.6 |
| pfu_aug1.0_17251.1_32785.t1 | 4 | 4 | EF-hand_6 | 157 | 180 | 3.4e-21 | 73.1 | 2.5e-08 | 3.1e-05 | 23.5 |
| pfu_aug1.0_17251.1_32785.t1 | 4 | 4 | EF-hand_5 | 158 | 176 | 3.1e-15 | 54.7 | 1.7e-09 | 2.1e-06 | 26.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_17251.1_32785.t1 | gi|326927237|ref|XP_003209799.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_17251.1_32785.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17251.1_32785.t1 gtgccttagaattccgacaactgatcatacttttgatgattgtcggctcatgcaaaaagcagcaaaacttaaactaccca aatctgctgggctagtagaattccagaaattacataataagttaagtgtgaagtttgatgatatgaatgtgttactagac aaatatggtgctatagccaagaacaaagaaggcaatatcacgatggaggaatttgccaaatatttacatctacctatctc tgacaccttacaggaagtgtttgatctctatgatagggatggctctggtaccatagatttcagggagtatgttataggac ttagtataatatcaacacctgttaatacagaggaaaccatcaagctcgcatttgagttgtttgataatggtaacaagggt cacattactcaggaggagctgtgtgagattctatataatgcattcaacatggatggcttagatgctgagaatctgtttaa ggaggtcgacaccgaccaggacggcaaaattagctttgatgaattccaggattacgctttacaaaaaccagaatatgcca agctttttatgacgtaccaagctaagaaaaatgaagagaaaacaggcaatggtcacccaaagacggaataa |
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Protein
| Protein ID | pfu_aug1.0_17251.1_32785.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17251.1_32785.t1 CLRIPTTDHTFDDCRLMQKAAKLKLPKSAGLVEFQKLHNKLSVKFDDMNVLLDKYGAIAKNKEGNITMEEFAKYLHLPIS DTLQEVFDLYDRDGSGTIDFREYVIGLSIISTPVNTEETIKLAFELFDNGNKGHITQEELCEILYNAFNMDGLDAENLFK EVDTDQDGKISFDEFQDYALQKPEYAKLFMTYQAKKNEEKTGNGHPKTE |
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