Gene
| Gene Model ID | pfu_aug1.0_1726.1_29829 |
|---|---|
| Locus | scaffold1726.1 : 87256 ... 94382 : + |
| To GenomeBrowser | scaffold1726.1:87256..94382 |
| Genes list of scaffold | scaffold1726.1 |
| Synonym | pfu_aug2.0_5.1_16689 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1726.1_29829.t1 | 1 | 1 | RD3 | 14 | 134 | 2.8e-35 | 120.7 | 5.2e-39 | 3.9e-35 | 120.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1726.1_29829.t1 | gi|291235828|ref|XP_002737849.1| | PREDICTED: protein RD3-like [Saccoglossus kowalevskii] | 6.0e-37 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1726.1_29829.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1726.1_29829.t1 atgtatcctttaaagagcatttggaaaagtttagtgccagaaacacaaaaattaccaaacaagaatgagaaaacacaggt tgtagatacaattcttagtgaactggattaccatataaaagaactggatgcattagctcgtgaaaaagaacagcaagaaa ggaggaagaacacaggagtggactatagctggttaataagcacgcctccaaaaacatacgaaattcctcaactagagaga ttggagttagaagagctctgctacaaagtcaaaccagaggaaagcggtaaaatcttatcaatattccgtgatacactata caatgaaccccaaaccaaagatctgccaaaaatcatgaaatcctgcatatcgcaaatcatcgagcaaaggccaaaggagg agaccttgtctgactgggtcagcaagaaaactatgagtctgaccaagcttcgacatcacacccgaatttcaccgtcctcc attactgatcccgaggcccaagaaacatctagtcaaacgtctgtagattcctttgatatgaaatcctcacggacgaccag tatcagtcttcaggattaccatggtgatatggaatcgctacctgtgtga |
|
Protein
| Protein ID | pfu_aug1.0_1726.1_29829.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1726.1_29829.t1 MYPLKSIWKSLVPETQKLPNKNEKTQVVDTILSELDYHIKELDALAREKEQQERRKNTGVDYSWLISTPPKTYEIPQLER LELEELCYKVKPEESGKILSIFRDTLYNEPQTKDLPKIMKSCISQIIEQRPKEETLSDWVSKKTMSLTKLRHHTRISPSS ITDPEAQETSSQTSVDSFDMKSSRTTSISLQDYHGDMESLPV |
|