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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_17272.1_32787
Locus scaffold17272.1 : 206 ... 2471 : +
To GenomeBrowser scaffold17272.1:206..2471
Genes list of scaffold scaffold17272.1
Synonym pfu_aug2.0_9.1_29935

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_17272.1_32787.t1 gi|115676889|ref|XP_001183935.1| 4.0e-16

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 2
egg-4cell 1
8-16cell 1
egg-Dshape 1
trochophore 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_17272.1_32787.t1
Definition-
>pfu_aug1.0_17272.1_32787.t1
atgtcttttttagctccagaatggatcattctgacctttataatgtgtgggaagctgttcatatctaccgtgtttggtat
gatatatacttatactggagaactgttccctacagacataaggtcctttaccattggctcgtgtagcttctttgccagga
ttggatctctagcatcaccatatttataccaaatagcaagtggtagaatgcagaaggcgttaccattgattatatacact
gctgtgttggccttggtaggctctatttccctggtcttaccagagaccagtaagacaactctaccagaccagatgaatgc
ttctgtccacaaggaaaatatggaattatcaatgccactgaaatctgaaggagagaatgaaaatcaaaatatggaatcaa
ctgaaaaagaagaaaatactttcagtgatgaaaacaattcatga

Protein
Protein IDpfu_aug1.0_17272.1_32787.t1
Definition-
>pfu_aug1.0_17272.1_32787.t1
MSFLAPEWIILTFIMCGKLFISTVFGMIYTYTGELFPTDIRSFTIGSCSFFARIGSLASPYLYQIASGRMQKALPLIIYT
AVLALVGSISLVLPETSKTTLPDQMNASVHKENMELSMPLKSEGENENQNMESTEKEENTFSDENNS

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