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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1729.1_58646
Locus scaffold1729.1 : 21376 ... 34916 : +
To GenomeBrowser scaffold1729.1:21376..34916
Genes list of scaffold scaffold1729.1
Synonym pfu_aug2.0_358.1_27287

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_1729.1_58646.t1 1 1 An_peroxidase 1 277 0.0 241.0 0.0 0.0 240.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_1729.1_58646.t1 gi|1150532|emb|CAA62752.1| peroxinectin [Pacifastacus leniusculus] 0.0

Transcript
Transcript IDpfu_aug1.0_1729.1_58646.t1
Definition-
>pfu_aug1.0_1729.1_58646.t1
atgaatcaggccacgtcttatcttgatgcgtcccaggtgtacggtgtggacgttgacgaacagttaaaactacgagctgg
agtaggaggattaatgaaaattactccccttggattaccccctccatcagacgaacctatctgtgtccaagaaaatcctg
gagactattgtatggcaacaggtgatttcagagtcaaccatgtacccggacttactgtgatgcacactttattccttcga
caacacaatcgtctggctacagggcttcatttgataaatgccaaatgggatgatgaacgggtgtttcaggaaactagaaa
aattataatcgccatagaacagcatattgtgtacaatcatttgttacccacaatcttaaataacgagtacatgacaaaat
acggactctggtcggaaaggaacggccatagcatgagctatgagtcagatgaggacgtgtccataatgatgggattttct
ggtgctgctatgaggtttcctcacaccagaatccctgacgtccagtcaagagtaaatttcaactacaaacgacgtcaaga
tgcaccaatattctcgacatttgataaaccaaaatttgtgttagaaaattacggtcgagctatggacgactttgctcgat
ggctcgtctccttccctgctatgaaagacgaccgattcgtagtagacggggtacgagatcatcttttcagagacgagaga
ggtgaaagttttgacctgattgcacttaatattcaaagagcccgagagcaaggtataccaccatataaccattggcggcg
actctgtggatttcagccggccaggtttttcacagttggacctggagggtttactgatatccctgtagatgttgtgaaga
aatatgcaatgctttacaaagtttttgacgtgtatctagagttatatcgtatggaagaaattcgtatcgaggaaaacttt
gaaaatgcttacaatgttactattgcataa

Protein
Protein IDpfu_aug1.0_1729.1_58646.t1
Definition-
>pfu_aug1.0_1729.1_58646.t1
MNQATSYLDASQVYGVDVDEQLKLRAGVGGLMKITPLGLPPPSDEPICVQENPGDYCMATGDFRVNHVPGLTVMHTLFLR
QHNRLATGLHLINAKWDDERVFQETRKIIIAIEQHIVYNHLLPTILNNEYMTKYGLWSERNGHSMSYESDEDVSIMMGFS
GAAMRFPHTRIPDVQSRVNFNYKRRQDAPIFSTFDKPKFVLENYGRAMDDFARWLVSFPAMKDDRFVVDGVRDHLFRDER
GESFDLIALNIQRAREQGIPPYNHWRRLCGFQPARFFTVGPGGFTDIPVDVVKKYAMLYKVFDVYLELYRMEEIRIEENF
ENAYNVTIA

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