Gene
| Gene Model ID | pfu_aug1.0_17338.1_69079 |
|---|---|
| Locus | scaffold17338.1 : 145 ... 11685 : - |
| To GenomeBrowser | scaffold17338.1:145..11685 |
| Genes list of scaffold | scaffold17338.1 |
| Synonym | pfu_aug2.0_635.1_17662 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_17338.1_69079.t1 | 2 | 1 | Cnd2 | 6 | 135 | 0.0 | 435.6 | 0.0 | 0.0 | 160.8 |
| pfu_aug1.0_17338.1_69079.t1 | 2 | 2 | Cnd2 | 138 | 626 | 0.0 | 435.6 | 0.0 | 0.0 | 279.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_17338.1_69079.t1 | gi|115934376|ref|XP_001187579.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_17338.1_69079.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17338.1_69079.t1 atgttaaccgcagagcatgatgatgcggccgagaaacgggaacgccgtcgatctcggattatccaacttcaacaaagtgc agctagtcccctatcaccaacagataaacgcagatccttgcctctcagtggattatcagccaatcagctcgcagaacact attctagttgtatcaaactttcagccgaaaataaaatcaacgccaagaatgcatttggactgcatctcatcgattatatg tcagatttggtcaagaaaaaagagcttgataatttccaggttgcgagcacaactctcgacgctagtgccaaaatctacgc tggcagagtggacgccatacatgctgagacatataaggtattgacaggactgggacgggagaaagataaaactaaagagg acgatgaagcatttgatgaaggtggtagcagcggccttctattaaacaatttacggtgttttgacgaccaacaagagctg gtgttagactcatcatcctctactgaccccgcctacctgcaccccgagggattcagtcaacctcagcctatagaactggc tgaaataaaaaataatccaatagcttatatcctttcagcattatttaggggagtggatataggcagtagagatgtttgtc catcgttttcaagttttgatttcacagactgggatataagtagagaaacttcaattcttccctccgcatcccagagttcc acgtcagcacatgtatttgacatgaacgctgaaccagagccgattatagaggcagatggtgatatggacgatgtaccatt taactcagattttcctggtgacggaatgtcagatcatgaaggaaatgcagtttataaatattctaacgaacataatttat ttagacatggaacaacagggacgttactgagtgtattagcttcagaaccctcagactattcttacttcaataaaagttta ctgagaacatgggcgggaccatctcactggagactggctccattatcaaaagatccaagattcaagggcattgtagacaa atcacagaaagcaaagaaacctgtgttcaaaatcgactacgatgcggaaaaagaattcaccaactaccttaaaccttcca aggccactaccctcaccactgccaccctcacgaagtacagtaaagataaaaataccttacccaaagatctccactacgac gccgataaattattccgactattttgtaaatctaaattgatgattaaaagacaggatacttcctcatccaatatcgttga tgacgacattgaaaactatgattatgagaataccaacgatcgagaaaatttctgtccgaaagaaggcgtagagatggata atgatgatgatggcggtgactttgattttaactttacacaagccggagagaactgtagtcaggaatctaacgattttact caggctgatgcaaccatgaataatactatactaggtgataaactcgtcagccagccgaacaaggttgcaaagatcgacat agattatgctaaaacggccaagaagttggatgtaaagaaactgaagggcgtcatatggaatcttctaacatcaaaacaga agacggctgacacggataaaacgacagaaaggatggaggaagggggaggggataatcaacagaaaccggaggtcactgcc ggtactagtaatgacaaggagatgggggctgaatgctcatttcaggaaatccttacccaactacctcaaaacgtgtccaa tcaaatggctcgtaacataagcactcctatagcctttgtatgcctgctacatttagctaatgaaaagtgtttaaagatag agagtgacaacatgactgatctcaagatttctcaggatcattattag |
|
Protein
| Protein ID | pfu_aug1.0_17338.1_69079.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17338.1_69079.t1 MLTAEHDDAAEKRERRRSRIIQLQQSAASPLSPTDKRRSLPLSGLSANQLAEHYSSCIKLSAENKINAKNAFGLHLIDYM SDLVKKKELDNFQVASTTLDASAKIYAGRVDAIHAETYKVLTGLGREKDKTKEDDEAFDEGGSSGLLLNNLRCFDDQQEL VLDSSSSTDPAYLHPEGFSQPQPIELAEIKNNPIAYILSALFRGVDIGSRDVCPSFSSFDFTDWDISRETSILPSASQSS TSAHVFDMNAEPEPIIEADGDMDDVPFNSDFPGDGMSDHEGNAVYKYSNEHNLFRHGTTGTLLSVLASEPSDYSYFNKSL LRTWAGPSHWRLAPLSKDPRFKGIVDKSQKAKKPVFKIDYDAEKEFTNYLKPSKATTLTTATLTKYSKDKNTLPKDLHYD ADKLFRLFCKSKLMIKRQDTSSSNIVDDDIENYDYENTNDRENFCPKEGVEMDNDDDGGDFDFNFTQAGENCSQESNDFT QADATMNNTILGDKLVSQPNKVAKIDIDYAKTAKKLDVKKLKGVIWNLLTSKQKTADTDKTTERMEEGGGDNQQKPEVTA GTSNDKEMGAECSFQEILTQLPQNVSNQMARNISTPIAFVCLLHLANEKCLKIESDNMTDLKISQDHY |
|