Gene
| Gene Model ID | pfu_aug1.0_17386.1_69084 |
|---|---|
| Locus | scaffold17386.1 : 296 ... 6099 : + |
| To GenomeBrowser | scaffold17386.1:296..6099 |
| Genes list of scaffold | scaffold17386.1 |
| Synonym | pfu_aug2.0_188.1_27003 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | SGMP1 |
| Description | reciprocal BLASTN hit to NCBI Accession AB689023 |
| mRNA evidence |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_17386.1_69084.t1 | gi|353678108|sp|P86957.1|SGQP_PINMA | Serine, glycine and glutamine-rich protein [Pinctada maxima] | 3.00004e-41 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| >Adult tissues | |
| mantle | 1 |
| mantleEdge | 2 |
| mantlePallium | 3 |
Transcript
| Transcript ID | pfu_aug1.0_17386.1_69084.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17386.1_69084.t1 atgaagacaaccctacttttggtggtgctgttaggcgtggcctactgcgatgacgacgaatggaatatgggcaacttctt ccatcaattccagcaatggcaacagcagagttcatcgtcaagcagtagcagcagtagcagtagtggcggcggaggaggaa gtggtggtggtggcagcagtgggggcggtggaagcagtggaggaggtggatctggtggtggaggttccggtggtggagga tccagcggcggaggtggtgtaactaaagtcgtcctcaaagccggaggaggtggcagtggaggtggtggcggcggcggtgg tggtgtgaccaaagtcgtcaaatcagttggaggaggtggtggtggaacaggaattacaaaacttttgtccttgggcggtt caagcggtggtggctctgtaggtggtggaagccttggtcttgtatcgggaggcggttcaggaggaaagtctgggatcgtg acagttagcaaacaaccaatcatcatcaaccgacaagtcacacatgtaaacaccggaggtagcggtgctggtggcgtcgg tggtggtaaatttggacttggtggtggaggtggatttggcggaagattcggagggcattatggaggttaccatcattaca acccatgtggttatggacacgtttactcatactactatggttgtcagccaatttacaaacagccggtgtaccaaccagta tatcaacagccacttcagactgtttaccaacaaccagtacaaactgtataccaacaaccataccagtatagctacagtca accatcaatcgcattccaaccacagacacagacaacaaaatacatttcctactcgtacccaaagtattactcccagggta gttaccccattgtaggtggatcgcacggaggtttattagggggatcatccggaggtttcgccactggtggttccggagga ttcagctttacatcaggtggaggcggtggtcatgctagctatccagtctcagtctttaaacatgcaaagggagaaaaata caagttataa |
|
Protein
| Protein ID | pfu_aug1.0_17386.1_69084.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17386.1_69084.t1 MKTTLLLVVLLGVAYCDDDEWNMGNFFHQFQQWQQQSSSSSSSSSSSSGGGGGSGGGGSSGGGGSSGGGGSGGGGSGGGG SSGGGGVTKVVLKAGGGGSGGGGGGGGGVTKVVKSVGGGGGGTGITKLLSLGGSSGGGSVGGGSLGLVSGGGSGGKSGIV TVSKQPIIINRQVTHVNTGGSGAGGVGGGKFGLGGGGGFGGRFGGHYGGYHHYNPCGYGHVYSYYYGCQPIYKQPVYQPV YQQPLQTVYQQPVQTVYQQPYQYSYSQPSIAFQPQTQTTKYISYSYPKYYSQGSYPIVGGSHGGLLGGSSGGFATGGSGG FSFTSGGGGGHASYPVSVFKHAKGEKYKL |
|