Gene
| Gene Model ID | pfu_aug1.0_174.1_43559 |
|---|---|
| Locus | scaffold174.1 : 64676 ... 66279 : + |
| To GenomeBrowser | scaffold174.1:64676..66279 |
| Genes list of scaffold | scaffold174.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_174.1_43559.t1 | 1 | 1 | Plant_tran | 159 | 341 | 3.4e-08 | 33.1 | 1.2e-11 | 8.8e-08 | 31.7 |
| pfu_aug1.0_174.1_43559.t1 | 1 | 1 | DDE_Tnp_4 | 175 | 339 | 1.3e-37 | 128.7 | 2.79993e-41 | 2.0e-37 | 128.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_174.1_43559.t1 | gi|72015146|ref|XP_783499.1| | PREDICTED: putative nuclease HARBI1 [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_174.1_43559.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_174.1_43559.t1 atggaagaagatgtattcgaggaagatcttgtctttgctcagttggctcaacatcgacaaaaaagaaaacgtaggacccc caaaagattctggattaggccctggatccaaagacgatctgaattcggacattatgaacgtcttatgtatgaacttgaaa atgaagatcggtcgtccttcgtgaattttctgaggattcaacccgagatgtttcgagaaatagaacggaggctgtctgtg aagttaaccaagaaggacacctggttccgagaagcaatgagacctggtctgaaattagccattgctctccgatacatggc ttctggcgacagttacaaaagccttatgtatggctttagagtgcctcacaataccatatcaatgatgataccagaggttt gtcaggcaattattcttgaatatggagatgaagtaatagcttgtccaaagacccaagaagaatggcgaaacgttgcagaa caatttggaactcgatggaacttccaccatgcccttggtgccatagatgggaaacatatcgccatcaaagccccgaagaa tagtgggtccttatactataactacaagggatttttctctatagttatgcttgctgttgtcgatgcagactacaaatttt tgtgggttgatgtcggagccaatggatcagcatccgatacacaagtattcaattcctgtgagctgaaacaagccatcgac aatgcagagatgaattttccaccccctgaaccacttccacatgataatgaggccatgcccttcttcttagtaggcgatga tgcctttgcgttacggacttggatgatgaaaccatactctaaacgtaacctatcacctgatgaacgtattttcaactaca gactttcacgttcgaggagagtggtcgaaaatgctttcggcattctcgctaatcgctttcaatgtctccttaccacaatg cgtcaaaagccagagacggtgcaaattatcgcactggcatgttgttgtcttcacaatttaatgaggattcggtatccagg agtccagacagctatattggatcaggcagacggcaacgataacatcattccaggtgaatggagaaatggtgccgtcatgc acgatctcgggatcaaccagagaggaaatgtggcaacacgggctgcccaacaacaaagagagtatctcaaggcatactac aactcatccgttggtgaagttccatggcaacataacattttatga |
|
Protein
| Protein ID | pfu_aug1.0_174.1_43559.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_174.1_43559.t1 MEEDVFEEDLVFAQLAQHRQKRKRRTPKRFWIRPWIQRRSEFGHYERLMYELENEDRSSFVNFLRIQPEMFREIERRLSV KLTKKDTWFREAMRPGLKLAIALRYMASGDSYKSLMYGFRVPHNTISMMIPEVCQAIILEYGDEVIACPKTQEEWRNVAE QFGTRWNFHHALGAIDGKHIAIKAPKNSGSLYYNYKGFFSIVMLAVVDADYKFLWVDVGANGSASDTQVFNSCELKQAID NAEMNFPPPEPLPHDNEAMPFFLVGDDAFALRTWMMKPYSKRNLSPDERIFNYRLSRSRRVVENAFGILANRFQCLLTTM RQKPETVQIIALACCCLHNLMRIRYPGVQTAILDQADGNDNIIPGEWRNGAVMHDLGINQRGNVATRAAQQQREYLKAYY NSSVGEVPWQHNIL |
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