Gene
| Gene Model ID | pfu_aug1.0_174.1_43560 |
|---|---|
| Locus | scaffold174.1 : 66353 ... 68725 : - |
| To GenomeBrowser | scaffold174.1:66353..68725 |
| Genes list of scaffold | scaffold174.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_174.1_43560.t1 | 2 | 1 | MADF_DNA_bdg | 144 | 224 | 3.5e-11 | 43.1 | 9.4e-15 | 3.5e-11 | 43.1 |
| pfu_aug1.0_174.1_43560.t1 | 2 | 2 | MADF_DNA_bdg | 321 | 345 | 3.5e-11 | 43.1 | 0.56 | 2100.0 | -1.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_174.1_43560.t1 | gi|72029177|ref|XP_792900.1| | 3.0e-16 |
Transcript
| Transcript ID | pfu_aug1.0_174.1_43560.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_174.1_43560.t1 atgtgtacgatgtcttggcgacatgcactcgagatgctacgagttatcacgacatttcttcaacatgcgtacgacattcc acgagttgtgttcgacatttcacgagttttgtacgacatcttcttgacctctggcgagttgtcttctgtgaacagtcctt gtcagtctgaagccatgcctgcgaagagaaggagggtaaagacaccaaagaagaaaatggggactgtaaacccaacacca gagtctccaaaggaaccttcaccatcccaaagttctgaggcacagccagaggaaccgagggtggaggttcaattacctcc tgtgatcgaatctaggtctgatggtggtgatgactgcagcgaagatgttagaccaaaggccaaacgtgtgtacaacaact tcacagaaagacaagaagaacttattgtcgagtggttacaagataacccaatactgtacaataagtgtctaaaagagtac aaaaacaaggagaagaagtctgctatgtggactgagatagcagtcaaactggatattcctgaagcccttctacacaagtg gtataagacgatgagaacacagttcgggaaattaatccaaaagaagtctggtgatggtgcccgtgattacacagaaagag agaaatgggtcctcacaaactttgcctttttaaaaggccacattgtccgagttgcaagcagacaggttggattttccagg gacaagaatggctgtcgcatcacatctagtacagtagcattgccctcagatgactccgaattagacgatgaagaagtgga atcccttgtagaccaggagattggagaagggtcatcattatccaaatcaccagcatctactgcccctgttccctcgaagg gcaaaaggacaaaaaaggcgcaaaaagacacagatctgcaagaccttatagataaactttcagaaagggctgagggaagc agagaaatgagagagaaggtgacagaaatggtcaagtctttggacaatccccatacagcttatgccaactatctggcctc tatgcatccttctatacaccaagacctgtgggatgattatctgcggaaaagccatgacacactcatgtattatgtcgggg aatcaaagcgtatccgtaagcttgaggagcaaccgtcacagatgcaacctcagatacaacaatacggacccacatacaat cagctgcaacctatggtacaacaacagcctcaacaatctaactttgcacattgtagtcgtgcacaacccagcattactga tgatacatggggtacaggatcgcaacaatatagaaatacagcgatgtcaactccagatccttctagctcgtctctggttt cccaggtaccatttggttcactggttagacagcttgatgatttatccgctgcacagtaa |
|
Protein
| Protein ID | pfu_aug1.0_174.1_43560.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_174.1_43560.t1 MCTMSWRHALEMLRVITTFLQHAYDIPRVVFDISRVLYDIFLTSGELSSVNSPCQSEAMPAKRRRVKTPKKKMGTVNPTP ESPKEPSPSQSSEAQPEEPRVEVQLPPVIESRSDGGDDCSEDVRPKAKRVYNNFTERQEELIVEWLQDNPILYNKCLKEY KNKEKKSAMWTEIAVKLDIPEALLHKWYKTMRTQFGKLIQKKSGDGARDYTEREKWVLTNFAFLKGHIVRVASRQVGFSR DKNGCRITSSTVALPSDDSELDDEEVESLVDQEIGEGSSLSKSPASTAPVPSKGKRTKKAQKDTDLQDLIDKLSERAEGS REMREKVTEMVKSLDNPHTAYANYLASMHPSIHQDLWDDYLRKSHDTLMYYVGESKRIRKLEEQPSQMQPQIQQYGPTYN QLQPMVQQQPQQSNFAHCSRAQPSITDDTWGTGSQQYRNTAMSTPDPSSSSLVSQVPFGSLVRQLDDLSAAQ |
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