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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_17423.1_18460
Locus scaffold17423.1 : 1 ... 16601 : +
To GenomeBrowser scaffold17423.1:1..16601
Genes list of scaffold scaffold17423.1
Synonym pfu_aug2.0_868.1_27860

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_17423.1_18460.t1 1 1 cNMP_binding 37 126 1.1e-08 34.7 1.6e-12 2.3e-08 33.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_17423.1_18460.t1 gi|291222538|ref|XP_002731273.1| 0.0

Transcript
Transcript IDpfu_aug1.0_17423.1_18460.t1
Definition-
>pfu_aug1.0_17423.1_18460.t1
agggcaaccagataccacaccagaagcacacgatgagttcatgcgcagttatcatgaaatctttgcacggccagagaaaa
aatctggattccctgaccattcacgaagacggagtgatcgctagtgagggatacaaggccccctacatcggcttcataaa
gaagggagagtgtcatgtccttagacaagtagatgtcatgcatacactcagaaatggaagaagggaaaagagaacaaagc
aggtagtgatgggaaaactgaaggattctgagtcgtttgccgaactgagtgtccttctggatgaaccaatcacatgtaca
atattaacttcgagtaatgttgagctgggagtgatcaagaaagatagaatcagagaattagacgatgacactaccaaact
ctttcaacaatcaaatgaacggacatttggcaatctaactaagaatgacatccaagaagagtatatgaaccaagaactga
agagagaatggaacgagttcaagcatggagtcatgatggaagtaataaattataaaggaattcgacctgggtacggaaaa
tgggcaaaataa

Protein
Protein IDpfu_aug1.0_17423.1_18460.t1
Definition-
>pfu_aug1.0_17423.1_18460.t1
GNQIPHQKHTMSSCAVIMKSLHGQRKNLDSLTIHEDGVIASEGYKAPYIGFIKKGECHVLRQVDVMHTLRNGRREKRTKQ
VVMGKLKDSESFAELSVLLDEPITCTILTSSNVELGVIKKDRIRELDDDTTKLFQQSNERTFGNLTKNDIQEEYMNQELK
REWNEFKHGVMMEVINYKGIRPGYGKWAK

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