Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_17436.1_47100
Locus scaffold17436.1 : 10355 ... 19825 : -
To GenomeBrowser scaffold17436.1:10355..19825
Genes list of scaffold scaffold17436.1
Synonym pfu_aug2.0_154.1_13687

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_17436.1_47100.t1 gi|260811450|ref|XP_002600435.1| hypothetical protein BRAFLDRAFT_99625 [Branchiostoma floridae] 5.0e-13

Transcript
Transcript IDpfu_aug1.0_17436.1_47100.t1
Definition-
>pfu_aug1.0_17436.1_47100.t1
atgtgcgactcctgtaagctaatccataagaagatccgacagatcaaatcccataaaattctacgtcttgaagaagttcg
ctctagtccacaaatactaaagatggtagaaggcaacgtcgactgcacgcaacacaccaaacgacagatcgagctcttct
gtcgacagcaccggaagctatgttgtgtcgtctgctttgcaaccgaccacagagaatgccctgatgtgaagacgattgac
gaacttgtaaaggatgaaaaaagtgaaggcgaacttacagagattatagaggctatgaaagaagtgatgaacagggcaga
agaacaaataagtcataaaactcaaactctgactctgatgacttttaaacacgaggaacttgcagaaaaaatagaatcga
tcactagaaaggccatagagagactgaaatcactgcgcaacgaggcgatagaaaaatttgaaatttgtcactcaaaagaa
acaaaacgcattgaatatcaacgcgatattctgcaaagttctaaacttgcgatgaaaatggacttgaaatacttagaagc
agtaacaaagcatggatcgccgaaacaagtgttcattacgtcagagaaaattcgacatcaagtcggatttcatcgtgaaa
ttctaacggtagatcaagaaaatcacgaggatgtggactacaaattcgaatttaatgaaattgtagaagatctttctcat
aaactatctgctttagggaaactcaaagttttgcgaaactctttggatgaaatggtccaggacaacgatagagagactgg
gatgaaatccgtgacctttagtatagctccaaatcaggcaccgactcgcttgtcagtcaagacatacagcactgctactc
catcatcgagaccacaaactctggaaaactgcgaagcctctcgcataagaatgagaaaggaaaaagattacgatggatcg
atgggaagcgaccgcaaaatctcatggtttacgggtggggttttctgtcttgacaacggccagtttataatggcggacta
caataaccacaagctcaaacggttcaaaagggacgtgtacagtcccatcatggaatacccagtagaatccgccccttgtg
acatagcacttgtacaggacgacgaaattcttgtttcgtttccccacgaatgtcgtatcaatcggtacaagctaagagac
gacgatatcctcaaacaaacggacaccattactacgttatcgcctccagagggcgtagccttcgtcgatcagaatatcat
agcctcgttttcagattgcatcaagatcatggacgaatatggaaaggaagtggtaaacataccaacgaaggaaagctccg
cttacaccattcctattgtagcctccaagaccggcaataccttcgtgcatcgtgacgggaacgccattgtgatcagatct
ctggacggagatgaaatatttagatttcggcatcggcaactaaaggaaccaagtggaataagtatggacttcaaagacaa
catttatgtctgtgattgcaactcgagcaacatctaccagatatccgcggatggtcagcgtgggcgaatcatacggtcct
cgcgactttgcgtgggcagccccgagcgtaaatatgcgaaagtttacgcagcgctgcgcattgatacgaactcttccgaa
gctagccgcgacatttcctgtagactagcagacgttagtacaattattccaagaggaaaggggaaagcatttcctaatgg
gctgttgcagtcgtacaccgaagaaccagacattgtgtattttccattttga

Protein
Protein IDpfu_aug1.0_17436.1_47100.t1
Definition-
>pfu_aug1.0_17436.1_47100.t1
MCDSCKLIHKKIRQIKSHKILRLEEVRSSPQILKMVEGNVDCTQHTKRQIELFCRQHRKLCCVVCFATDHRECPDVKTID
ELVKDEKSEGELTEIIEAMKEVMNRAEEQISHKTQTLTLMTFKHEELAEKIESITRKAIERLKSLRNEAIEKFEICHSKE
TKRIEYQRDILQSSKLAMKMDLKYLEAVTKHGSPKQVFITSEKIRHQVGFHREILTVDQENHEDVDYKFEFNEIVEDLSH
KLSALGKLKVLRNSLDEMVQDNDRETGMKSVTFSIAPNQAPTRLSVKTYSTATPSSRPQTLENCEASRIRMRKEKDYDGS
MGSDRKISWFTGGVFCLDNGQFIMADYNNHKLKRFKRDVYSPIMEYPVESAPCDIALVQDDEILVSFPHECRINRYKLRD
DDILKQTDTITTLSPPEGVAFVDQNIIASFSDCIKIMDEYGKEVVNIPTKESSAYTIPIVASKTGNTFVHRDGNAIVIRS
LDGDEIFRFRHRQLKEPSGISMDFKDNIYVCDCNSSNIYQISADGQRGRIIRSSRLCVGSPERKYAKVYAALRIDTNSSE
ASRDISCRLADVSTIIPRGKGKAFPNGLLQSYTEEPDIVYFPF

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495