Gene
| Gene Model ID | pfu_aug1.0_17452.1_69097 |
|---|---|
| Locus | scaffold17452.1 : 1 ... 20629 : - |
| To GenomeBrowser | scaffold17452.1:1..20629 |
| Genes list of scaffold | scaffold17452.1 |
| Synonym | pfu_aug2.0_603.1_10981 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_17452.1_69097.t1 | 1 | 1 | Rad54_N | 5 | 54 | 6.7e-06 | 26.0 | 4.3e-09 | 1.1e-05 | 25.3 |
| pfu_aug1.0_17452.1_69097.t1 | 1 | 1 | DEAD | 78 | 219 | 1.7e-07 | 30.9 | 9.5e-11 | 2.3e-07 | 30.4 |
| pfu_aug1.0_17452.1_69097.t1 | 1 | 1 | SNF2_N | 93 | 250 | 1.8e-31 | 109.1 | 7.9e-35 | 2.0e-31 | 108.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_17452.1_69097.t1 | gi|72012428|ref|XP_783733.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_17452.1_69097.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17452.1_69097.t1 gaggctttcattaagaagatattatccaaaccttttaaagtaccaattccaaattataaagggtcagcctttgccagtcg agtgttgggaatcagacgtcagggtagtagacagcctttacatgatccgtgtgaggaaggagcccttatattgtacagcc ctccagagttatctgcccatgaacagctgaagattgatttagagaaacaaccagtgtttgttgttgtggatccaatattg actaaggttctacgtcctcatcaaagagagcgtcagagtccagattgttgtcctttgatagacaaagctgttgtagtctc acctagcagtttagtcaagaactggtataatgaaatcagcaagtggttaagtggcaaggtcaatgctatagctatagact cgggcactaaaaaggaaattgataagcagctgagtcagttcatgcagcagcaaggaagacgtaatcctttccctatcctt attatatcatatgaaacatttcgtctccatgctcatgtgatgcatcgagggtcagtgggattggtcatctgtgatgaggg tcatagattgaagaattctgagaatcagacttaccaagctttgaatggtctgaatgccaagagacggatcctgctatctg gtaccccaatacagaatgacttattggaatacttcagtcttatacactttgtaaatggaggcattctagggaaagatgtg actcaatggagagtgcttctggaggagaccgaaatttcagaagatcttggaagaaagaatcacgaggaccacgtgttcag tgggcagatgagaggaagcacgaagacttatcgtctgcttcagattcagagggtgaacagcatcctgatgacatcaaacg ggtatcgtcaagagctccaagacctattttaa |
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Protein
| Protein ID | pfu_aug1.0_17452.1_69097.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17452.1_69097.t1 EAFIKKILSKPFKVPIPNYKGSAFASRVLGIRRQGSRQPLHDPCEEGALILYSPPELSAHEQLKIDLEKQPVFVVVDPIL TKVLRPHQRERQSPDCCPLIDKAVVVSPSSLVKNWYNEISKWLSGKVNAIAIDSGTKKEIDKQLSQFMQQQGRRNPFPIL IISYETFRLHAHVMHRGSVGLVICDEGHRLKNSENQTYQALNGLNAKRRILLSGTPIQNDLLEYFSLIHFVNGGILGKDV TQWRVLLEETEISEDLGRKNHEDHVFSGQMRGSTKTYRLLQIQRVNSILMTSNGYRQELQDLF |
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