Gene
| Gene Model ID | pfu_aug1.0_17458.1_03829 |
|---|---|
| Locus | scaffold17458.1 : 6656 ... 10926 : + |
| To GenomeBrowser | scaffold17458.1:6656..10926 |
| Genes list of scaffold | scaffold17458.1 |
| Synonym | pfu_aug2.0_2581.1_05589 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_17458.1_03829.t1 | 4 | 1 | Kelch_2 | 14 | 56 | 1.2e-14 | 53.3 | 0.11 | 270.0 | 1.5 |
| pfu_aug1.0_17458.1_03829.t1 | 3 | 1 | Kelch_5 | 63 | 81 | 6.5e-13 | 48.3 | 0.00086 | 2.1 | 8.3 |
| pfu_aug1.0_17458.1_03829.t1 | 3 | 1 | Kelch_1 | 64 | 108 | 5.2e-30 | 102.7 | 1.4e-13 | 3.4e-10 | 39.3 |
| pfu_aug1.0_17458.1_03829.t1 | 3 | 1 | Kelch_6 | 64 | 111 | 4.4e-23 | 80.4 | 6.8e-12 | 1.7e-08 | 34.2 |
| pfu_aug1.0_17458.1_03829.t1 | 3 | 1 | Kelch_4 | 67 | 109 | 2.6e-23 | 81.5 | 1.9e-08 | 4.8e-05 | 23.0 |
| pfu_aug1.0_17458.1_03829.t1 | 4 | 2 | Kelch_2 | 67 | 108 | 1.2e-14 | 53.3 | 2.7e-06 | 0.0067 | 16.1 |
| pfu_aug1.0_17458.1_03829.t1 | 3 | 1 | Kelch_3 | 72 | 117 | 8.4e-20 | 70.3 | 8.4e-11 | 2.1e-07 | 30.9 |
| pfu_aug1.0_17458.1_03829.t1 | 3 | 2 | Kelch_5 | 107 | 146 | 6.5e-13 | 48.3 | 5.3e-07 | 0.0013 | 18.6 |
| pfu_aug1.0_17458.1_03829.t1 | 3 | 2 | Kelch_1 | 110 | 153 | 5.2e-30 | 102.7 | 8.9e-14 | 2.2e-10 | 39.8 |
| pfu_aug1.0_17458.1_03829.t1 | 3 | 2 | Kelch_6 | 111 | 150 | 4.4e-23 | 80.4 | 7.0e-10 | 1.7e-06 | 27.9 |
| pfu_aug1.0_17458.1_03829.t1 | 4 | 3 | Kelch_2 | 111 | 151 | 1.2e-14 | 53.3 | 1.7e-07 | 0.00042 | 19.9 |
| pfu_aug1.0_17458.1_03829.t1 | 3 | 2 | Kelch_4 | 115 | 155 | 2.6e-23 | 81.5 | 7.0e-12 | 1.7e-08 | 34.0 |
| pfu_aug1.0_17458.1_03829.t1 | 3 | 2 | Kelch_3 | 121 | 166 | 8.4e-20 | 70.3 | 6.6e-12 | 1.6e-08 | 34.4 |
| pfu_aug1.0_17458.1_03829.t1 | 3 | 3 | Kelch_5 | 157 | 178 | 6.5e-13 | 48.3 | 6.6e-07 | 0.0016 | 18.3 |
| pfu_aug1.0_17458.1_03829.t1 | 3 | 3 | Kelch_1 | 158 | 185 | 5.2e-30 | 102.7 | 5.6e-08 | 0.00014 | 21.3 |
| pfu_aug1.0_17458.1_03829.t1 | 3 | 3 | Kelch_4 | 158 | 187 | 2.6e-23 | 81.5 | 6.4e-08 | 0.00016 | 21.3 |
| pfu_aug1.0_17458.1_03829.t1 | 3 | 3 | Kelch_6 | 158 | 186 | 4.4e-23 | 80.4 | 2.1e-06 | 0.0051 | 16.9 |
| pfu_aug1.0_17458.1_03829.t1 | 4 | 4 | Kelch_2 | 158 | 182 | 1.2e-14 | 53.3 | 6.8e-05 | 0.17 | 11.7 |
| pfu_aug1.0_17458.1_03829.t1 | 3 | 3 | Kelch_3 | 169 | 187 | 8.4e-20 | 70.3 | 0.15 | 360.0 | 1.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_17458.1_03829.t1 | gi|325982533|ref|YP_004294935.1| | 8.0e-14 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_17458.1_03829.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17458.1_03829.t1 atgagcgttaatggcttgccgtccgtacataaatccaccaccaccacttccttcttgcagtcccggctgtacactattag tcggtccggatccggtgaagccttttacgtcatcataagtccgcatcatgacgaaatcttgtcgtaccaaatcagaatcg aacattggaaggctacgaagcacgtggctgattttggtgtagcagtttatagaaatgttctctatgttatcggaggattc aatatcaagacggcaaaacatttgaaaacagtggtcagatataatcccgatgatggactttggaaagaagtgcagtccat gccaacagccagagccaaatttgcaacagccgtacaggacggaaaaatcttagtattaggtggtgaaggtcaagacggca gagttacctcctcctgttattcatacgatccggagacggatgaatggacgatttcctcctcattagtgtcgcctagagcc aatcacgcatgcgtagtatgcaacaaagaaatttattgttccggtgggagatacgggaataaaagtcataaaaatatctg gtag |
|
Protein
| Protein ID | pfu_aug1.0_17458.1_03829.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17458.1_03829.t1 MSVNGLPSVHKSTTTTSFLQSRLYTISRSGSGEAFYVIISPHHDEILSYQIRIEHWKATKHVADFGVAVYRNVLYVIGGF NIKTAKHLKTVVRYNPDDGLWKEVQSMPTARAKFATAVQDGKILVLGGEGQDGRVTSSCYSYDPETDEWTISSSLVSPRA NHACVVCNKEIYCSGGRYGNKSHKNIW |
|