Gene
| Gene Model ID | pfu_aug1.0_174788.1_06751 |
|---|---|
| Locus | scaffold174788.1 : 1 ... 840 : - |
| To GenomeBrowser | scaffold174788.1:1..840 |
| Genes list of scaffold | scaffold174788.1 |
| Synonym | pfu_aug2.0_297.1_23819 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_174788.1_06751.t1 | 1 | 1 | Autophagy_act_C | 33 | 72 | 4.4e-17 | 62.0 | 3.8e-21 | 5.6e-17 | 61.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_174788.1_06751.t1 | gi|260796357|ref|XP_002593171.1| | hypothetical protein BRAFLDRAFT_120153 [Branchiostoma floridae] | 5.0e-27 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_174788.1_06751.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_174788.1_06751.t1 gcgacactggatgccaaagttattcaaagacaagaatcagagggagcccaaggaacagaaagtggtgtgctacaaactag aacttatgaccttaatataacctacgataaatattaccaaacacctcgactatggctgttcggttatgatgagaatagga aacctttaacagtagaacaaatgtatgaagattttagtcaagatcatgccaagaaaac |
|
Protein
| Protein ID | pfu_aug1.0_174788.1_06751.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_174788.1_06751.t1 ATLDAKVIQRQESEGAQGTESGVLQTRTYDLNITYDKYYQTPRLWLFGYDENRKPLTVEQMYEDFSQDHAKK |
|