Gene
| Gene Model ID | pfu_aug1.0_1749.1_44128 |
|---|---|
| Locus | scaffold1749.1 : 46076 ... 64683 : + |
| To GenomeBrowser | scaffold1749.1:46076..64683 |
| Genes list of scaffold | scaffold1749.1 |
| Synonym | pfu_aug2.0_868.1_27866 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1749.1_44128.t1 | 8 | 1 | EGF | 2 | 27 | 3.0e-40 | 135.7 | 6.1e-10 | 1.8e-06 | 27.7 |
| pfu_aug1.0_1749.1_44128.t1 | 8 | 1 | EGF_2 | 3 | 30 | 5.5e-14 | 52.0 | 1.5e-05 | 0.045 | 13.9 |
| pfu_aug1.0_1749.1_44128.t1 | 8 | 2 | EGF | 36 | 67 | 3.0e-40 | 135.7 | 3.4e-10 | 1.0e-06 | 28.5 |
| pfu_aug1.0_1749.1_44128.t1 | 8 | 2 | EGF_2 | 40 | 69 | 5.5e-14 | 52.0 | 2.0e-05 | 0.06 | 13.5 |
| pfu_aug1.0_1749.1_44128.t1 | 8 | 3 | EGF | 75 | 106 | 3.0e-40 | 135.7 | 4.9e-10 | 1.5e-06 | 28.0 |
| pfu_aug1.0_1749.1_44128.t1 | 8 | 3 | EGF_2 | 75 | 108 | 5.5e-14 | 52.0 | 1.2e-06 | 0.0036 | 17.4 |
| pfu_aug1.0_1749.1_44128.t1 | 8 | 4 | EGF | 114 | 124 | 3.0e-40 | 135.7 | 0.023 | 69.0 | 3.5 |
| pfu_aug1.0_1749.1_44128.t1 | 8 | 4 | EGF_2 | 114 | 124 | 5.5e-14 | 52.0 | 0.38 | 1100.0 | -0.2 |
| pfu_aug1.0_1749.1_44128.t1 | 8 | 5 | EGF | 132 | 162 | 3.0e-40 | 135.7 | 2.4e-10 | 7.1e-07 | 29.0 |
| pfu_aug1.0_1749.1_44128.t1 | 8 | 5 | EGF_2 | 132 | 165 | 5.5e-14 | 52.0 | 4.4e-06 | 0.013 | 15.6 |
| pfu_aug1.0_1749.1_44128.t1 | 8 | 6 | EGF | 171 | 201 | 3.0e-40 | 135.7 | 1.1e-10 | 3.4e-07 | 30.0 |
| pfu_aug1.0_1749.1_44128.t1 | 8 | 6 | EGF_2 | 171 | 204 | 5.5e-14 | 52.0 | 1.3e-05 | 0.037 | 14.1 |
| pfu_aug1.0_1749.1_44128.t1 | 8 | 7 | EGF | 210 | 241 | 3.0e-40 | 135.7 | 1.2e-07 | 0.00036 | 20.4 |
| pfu_aug1.0_1749.1_44128.t1 | 8 | 7 | EGF_2 | 213 | 243 | 5.5e-14 | 52.0 | 8.9e-05 | 0.26 | 11.4 |
| pfu_aug1.0_1749.1_44128.t1 | 2 | 1 | MAM | 248 | 335 | 6.09565e-43 | 146.3 | 3.9e-22 | 1.1e-18 | 67.4 |
| pfu_aug1.0_1749.1_44128.t1 | 8 | 8 | EGF | 340 | 365 | 3.0e-40 | 135.7 | 3.0e-05 | 0.088 | 12.7 |
| pfu_aug1.0_1749.1_44128.t1 | 8 | 8 | EGF_2 | 341 | 367 | 5.5e-14 | 52.0 | 0.00021 | 0.62 | 10.2 |
| pfu_aug1.0_1749.1_44128.t1 | 2 | 2 | MAM | 378 | 552 | 6.09565e-43 | 146.3 | 5.8e-23 | 1.7e-19 | 70.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1749.1_44128.t1 | gi|156351203|ref|XP_001622406.1| | hypothetical protein NEMVEDRAFT_v1g141380 [Nematostella vectensis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1749.1_44128.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1749.1_44128.t1 atgccctgtcaaaatggcgctacatgtaatgacctgccaggaggagcatttacctgtcagtgtcctgctgccttcactgg attcttctgtcagacagctttcccttgtggacctgctccgtgtatgaatggaggaacgtgtatggaaagtactgatggaa cgacatacacgtgcagctgtcctgcagagtttactggaagtgattgtgaaactctgatcccatgtagcgactctccctgt caaaatggtggaacatgtactgatagcgctgacttctcctcttatgactgtgattgcccttctgaatatacaggacaaga ctgtgaaacttttattccatgcagtgacgatccatgtcagaatggagggacaaactgtgaaactagactaccatgctctg atgacccttgtcagaacggaggaacatgtacagacagcacagatggttcatcctacacatgtgcttgtacatcggaatac acaggaaccgactgtgaaactattgttcgttgcagtgaggatccatgtcagaatggagggacatgtacagacagtcctga cttttcgtccttcacatgtgcctgcccgaccgactttactggcacaaactgcgaaacagccctaccctgtctgtcatctc cttgccaaaatagtggtacatgtgttaataatgaggatgggtcttcttatacatgcacatgtcctgacgacttctgtggc gatgattgtgagaaaatggacgcagatgatcatagatgtatagcgttttactatcatatgtttggaatcggcaccggtac cctcagagttctcctcagaaacgttataactggggtagaggaggaagagttctccctcagtggtaaccaaggcaacgaat gggtactgaccggtttggaaatagattccatggaggacaaagaggtaatctttgaggcagtatgtggatcagaccatcga agtgatatagctatagatcagatcagagttgtacccggatcttgtggttgcatatcggagccctgcgccaggggtcgctg tatattccaatatggagggttcatctgtaggtgcccggcgggctacacgggctcagattgtaccattgtcactagcagag agctcaaatgtctgttctataacccttgcacatggttcgtagattctgaaacggacgattttgattggtcaagatctggt aaattccccacaccgacggcaaatacaggaccgtctgccttccccacaggctggtacggttatctggagagctcaggacg gagccccggagacagtgcggtactaacgacggaaggcaatggtgtaacttttgataatcgagtgcggtgtttgtcattca ggtaccatatgttcggagacgatatcggaacattgagtatatatgccggaaatgcagtaactccgatttggtcagagagt ggtaaccaaggtgacgtttggattagtgacgccgtgacattacccgctatggacaatttatggacggctttatcttcaaa gacggtatgccacgcttaccaagcctatgtcactcaggtgagaatagagggaacggttggcaccggaagtattcccggag atgttcagggcgacatcgccattgataacgtcatcatcactgatggagcatgcccttga |
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Protein
| Protein ID | pfu_aug1.0_1749.1_44128.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1749.1_44128.t1 MPCQNGATCNDLPGGAFTCQCPAAFTGFFCQTAFPCGPAPCMNGGTCMESTDGTTYTCSCPAEFTGSDCETLIPCSDSPC QNGGTCTDSADFSSYDCDCPSEYTGQDCETFIPCSDDPCQNGGTNCETRLPCSDDPCQNGGTCTDSTDGSSYTCACTSEY TGTDCETIVRCSEDPCQNGGTCTDSPDFSSFTCACPTDFTGTNCETALPCLSSPCQNSGTCVNNEDGSSYTCTCPDDFCG DDCEKMDADDHRCIAFYYHMFGIGTGTLRVLLRNVITGVEEEEFSLSGNQGNEWVLTGLEIDSMEDKEVIFEAVCGSDHR SDIAIDQIRVVPGSCGCISEPCARGRCIFQYGGFICRCPAGYTGSDCTIVTSRELKCLFYNPCTWFVDSETDDFDWSRSG KFPTPTANTGPSAFPTGWYGYLESSGRSPGDSAVLTTEGNGVTFDNRVRCLSFRYHMFGDDIGTLSIYAGNAVTPIWSES GNQGDVWISDAVTLPAMDNLWTALSSKTVCHAYQAYVTQVRIEGTVGTGSIPGDVQGDIAIDNVIITDGACP |
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