Gene
| Gene Model ID | pfu_aug1.0_1750.1_37102 |
|---|---|
| Locus | scaffold1750.1 : 14110 ... 20565 : - |
| To GenomeBrowser | scaffold1750.1:14110..20565 |
| Genes list of scaffold | scaffold1750.1 |
| Synonym | pfu_aug2.0_740.1_01091 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1750.1_37102.t1 | 8 | 1 | LRR_8 | 81 | 113 | 0.0 | 194.5 | 0.077 | 71.0 | 3.2 |
| pfu_aug1.0_1750.1_37102.t1 | 6 | 1 | LRR_4 | 83 | 116 | 5.3e-29 | 99.3 | 0.0037 | 3.5 | 7.3 |
| pfu_aug1.0_1750.1_37102.t1 | 11 | 1 | LRR_1 | 83 | 97 | 2.6e-15 | 54.0 | 0.034 | 32.0 | 5.1 |
| pfu_aug1.0_1750.1_37102.t1 | 8 | 1 | LRR_7 | 83 | 93 | 3.6e-07 | 29.3 | 0.17 | 150.0 | 3.2 |
| pfu_aug1.0_1750.1_37102.t1 | 8 | 1 | LRR_6 | 83 | 93 | 8.5e-07 | 28.4 | 0.083 | 77.0 | 3.8 |
| pfu_aug1.0_1750.1_37102.t1 | 8 | 2 | LRR_8 | 104 | 161 | 0.0 | 194.5 | 1.9e-12 | 1.7e-09 | 37.2 |
| pfu_aug1.0_1750.1_37102.t1 | 6 | 2 | LRR_4 | 104 | 141 | 5.3e-29 | 99.3 | 3.9e-09 | 3.6e-06 | 26.4 |
| pfu_aug1.0_1750.1_37102.t1 | 11 | 2 | LRR_1 | 104 | 119 | 2.6e-15 | 54.0 | 0.022 | 21.0 | 5.6 |
| pfu_aug1.0_1750.1_37102.t1 | 8 | 2 | LRR_6 | 104 | 113 | 8.5e-07 | 28.4 | 0.4 | 370.0 | 1.7 |
| pfu_aug1.0_1750.1_37102.t1 | 8 | 2 | LRR_7 | 105 | 115 | 3.6e-07 | 29.3 | 0.23 | 210.0 | 2.8 |
| pfu_aug1.0_1750.1_37102.t1 | 2 | 1 | LRR_5 | 125 | 244 | 1.6e-17 | 63.4 | 5.2e-10 | 4.8e-07 | 29.5 |
| pfu_aug1.0_1750.1_37102.t1 | 8 | 3 | LRR_7 | 125 | 140 | 3.6e-07 | 29.3 | 0.042 | 39.0 | 5.0 |
| pfu_aug1.0_1750.1_37102.t1 | 8 | 3 | LRR_6 | 125 | 139 | 8.5e-07 | 28.4 | 0.02 | 19.0 | 5.7 |
| pfu_aug1.0_1750.1_37102.t1 | 8 | 3 | LRR_8 | 126 | 185 | 0.0 | 194.5 | 4.9e-19 | 4.6e-16 | 58.3 |
| pfu_aug1.0_1750.1_37102.t1 | 11 | 3 | LRR_1 | 126 | 148 | 2.6e-15 | 54.0 | 0.0023 | 2.2 | 8.6 |
| pfu_aug1.0_1750.1_37102.t1 | 8 | 4 | LRR_6 | 149 | 170 | 8.5e-07 | 28.4 | 0.0013 | 1.2 | 9.4 |
| pfu_aug1.0_1750.1_37102.t1 | 8 | 4 | LRR_8 | 150 | 209 | 0.0 | 194.5 | 1.9e-17 | 1.7e-14 | 53.2 |
| pfu_aug1.0_1750.1_37102.t1 | 8 | 4 | LRR_7 | 150 | 164 | 3.6e-07 | 29.3 | 0.023 | 21.0 | 5.8 |
| pfu_aug1.0_1750.1_37102.t1 | 6 | 3 | LRR_4 | 151 | 185 | 5.3e-29 | 99.3 | 3.6e-07 | 0.00033 | 20.1 |
| pfu_aug1.0_1750.1_37102.t1 | 11 | 4 | LRR_1 | 151 | 172 | 2.6e-15 | 54.0 | 0.00039 | 0.36 | 11.0 |
| pfu_aug1.0_1750.1_37102.t1 | 8 | 5 | LRR_7 | 174 | 188 | 3.6e-07 | 29.3 | 0.045 | 42.0 | 4.9 |
| pfu_aug1.0_1750.1_37102.t1 | 11 | 5 | LRR_1 | 175 | 191 | 2.6e-15 | 54.0 | 0.037 | 34.0 | 5.0 |
| pfu_aug1.0_1750.1_37102.t1 | 8 | 5 | LRR_6 | 196 | 215 | 8.5e-07 | 28.4 | 0.0038 | 3.5 | 7.9 |
| pfu_aug1.0_1750.1_37102.t1 | 8 | 5 | LRR_8 | 197 | 257 | 0.0 | 194.5 | 1.1e-17 | 1.1e-14 | 53.9 |
| pfu_aug1.0_1750.1_37102.t1 | 6 | 4 | LRR_4 | 197 | 233 | 5.3e-29 | 99.3 | 9.0e-07 | 0.00083 | 18.9 |
| pfu_aug1.0_1750.1_37102.t1 | 8 | 6 | LRR_7 | 197 | 210 | 3.6e-07 | 29.3 | 0.12 | 110.0 | 3.7 |
| pfu_aug1.0_1750.1_37102.t1 | 11 | 6 | LRR_1 | 198 | 218 | 2.6e-15 | 54.0 | 0.0039 | 3.7 | 7.9 |
| pfu_aug1.0_1750.1_37102.t1 | 11 | 7 | LRR_1 | 223 | 244 | 2.6e-15 | 54.0 | 0.03 | 28.0 | 5.2 |
| pfu_aug1.0_1750.1_37102.t1 | 8 | 6 | LRR_6 | 246 | 257 | 8.5e-07 | 28.4 | 0.68 | 630.0 | 1.0 |
| pfu_aug1.0_1750.1_37102.t1 | 6 | 5 | LRR_4 | 247 | 282 | 5.3e-29 | 99.3 | 2.1e-07 | 0.00019 | 20.9 |
| pfu_aug1.0_1750.1_37102.t1 | 11 | 8 | LRR_1 | 247 | 262 | 2.6e-15 | 54.0 | 0.051 | 47.0 | 4.5 |
| pfu_aug1.0_1750.1_37102.t1 | 8 | 6 | LRR_8 | 264 | 299 | 0.0 | 194.5 | 5.6e-06 | 0.0052 | 16.5 |
| pfu_aug1.0_1750.1_37102.t1 | 11 | 9 | LRR_1 | 268 | 290 | 2.6e-15 | 54.0 | 0.025 | 23.0 | 5.5 |
| pfu_aug1.0_1750.1_37102.t1 | 8 | 7 | LRR_7 | 268 | 279 | 3.6e-07 | 29.3 | 1.0 | 920.0 | 0.9 |
| pfu_aug1.0_1750.1_37102.t1 | 2 | 2 | LRR_5 | 279 | 372 | 1.6e-17 | 63.4 | 1.5e-10 | 1.4e-07 | 31.2 |
| pfu_aug1.0_1750.1_37102.t1 | 8 | 7 | LRR_8 | 292 | 325 | 0.0 | 194.5 | 0.00019 | 0.18 | 11.6 |
| pfu_aug1.0_1750.1_37102.t1 | 8 | 8 | LRR_8 | 317 | 375 | 0.0 | 194.5 | 1.2e-13 | 1.1e-10 | 41.0 |
| pfu_aug1.0_1750.1_37102.t1 | 11 | 10 | LRR_1 | 317 | 339 | 2.6e-15 | 54.0 | 0.27 | 250.0 | 2.3 |
| pfu_aug1.0_1750.1_37102.t1 | 8 | 7 | LRR_6 | 339 | 354 | 8.5e-07 | 28.4 | 0.011 | 10.0 | 6.5 |
| pfu_aug1.0_1750.1_37102.t1 | 6 | 6 | LRR_4 | 340 | 380 | 5.3e-29 | 99.3 | 5.5e-09 | 5.1e-06 | 25.9 |
| pfu_aug1.0_1750.1_37102.t1 | 8 | 8 | LRR_7 | 340 | 355 | 3.6e-07 | 29.3 | 0.00011 | 0.1 | 12.8 |
| pfu_aug1.0_1750.1_37102.t1 | 11 | 11 | LRR_1 | 342 | 362 | 2.6e-15 | 54.0 | 0.0022 | 2.0 | 8.7 |
| pfu_aug1.0_1750.1_37102.t1 | 8 | 8 | LRR_6 | 362 | 375 | 8.5e-07 | 28.4 | 0.84 | 780.0 | 0.7 |
| pfu_aug1.0_1750.1_37102.t1 | 1 | 1 | Ig_3 | 441 | 509 | 1.1e-07 | 32.1 | 6.2e-10 | 5.7e-07 | 29.9 |
| pfu_aug1.0_1750.1_37102.t1 | 1 | 1 | I-set | 443 | 519 | 7.3e-12 | 44.9 | 2.5e-14 | 2.3e-11 | 43.3 |
| pfu_aug1.0_1750.1_37102.t1 | 1 | 1 | Ig_2 | 443 | 524 | 3.2e-09 | 36.7 | 1.0e-11 | 9.5e-09 | 35.2 |
| pfu_aug1.0_1750.1_37102.t1 | 1 | 1 | V-set | 443 | 522 | 8.7e-06 | 25.6 | 2.4e-08 | 2.3e-05 | 24.2 |
| pfu_aug1.0_1750.1_37102.t1 | 1 | 1 | fn3 | 534 | 599 | 2.2e-11 | 43.7 | 5.0e-14 | 4.6e-11 | 42.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1750.1_37102.t1 | gi|240981496|ref|XP_002403750.1| | leucine-rich transmembrane protein, putative [Ixodes scapularis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_1750.1_37102.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1750.1_37102.t1 atgttgagaaattataaatatcaatgcgggtgccgttatattttcggtttgatacttattttcttttcattttcaacaaa tgaaactgcgtcgaatgacagtaaatttgtatggaaaacaacatgtcccgtgaattgtacttgcaaaaaaggaagtgttc gaaatacgaaatactacttggcgaaagttgtgaattgtagtatggcgggattggacagagctccaaggaatctgccgtct gataccgaagtacttgacctttctaggaatggaatcgaacacccggattttcaaaatacatttcttcaaatcaaattcct cgatctgtctcacaatctgctggtcagtgtggacaaacgaattcgtaaatttactaaactgaagtatcttcaacttcaaa ataacaggatttcaggactggaaaatggcatatttagtggtctcaagtacctgtcagtattggatttgtctcagaatcat ttatcctccatagaggcgcatgcgtttggtggactgaattacctacagaaactgcgcctagatggaaaccgcattgtttt tctagaaagacaatggtttttaagtatgccctccttgcactggttgtacctatctcgaaatcgcatatccaggatcgatg gtaaaatgttcgaaacactatccgggttgaaaatgttgaagatctctcacaacaacttacgcctgcttcacaacgattcg ttttacggtttgaagggtataagaatcttagacatgtcatacaataaactaattagagtgccagaactgcacgaaatgag gaatcttttgtacctctacctcgattccaatcccatactacgtgtgtctgaaggagcgttcgacaatctaaatatttcga tgattactttgagctacatgtcggatctcaaagtcgttgagagacatgccttcaagaatttacacggtttagtgactctg cagatacacgataacgtacaactagtctacatagatccagaagcgttcataaattgtccatatttgaaaaacctttatct tcacaacaatcaacttcataccatatcagaatcaatcaaagatcttccggctttgacgactatacatttctataacaatc gactggtatgtgattgcaatgttctatggatgaaacaggaattaattcacgaaaaacttatgaattatacatctgtgctg tttgacgattccattttgaagtgtacgtctccgccagaacgatacggtatgcttctaaaagaaatgccactcgattggct gaacaagtcgtgttcgccgacaaacctgcctctttttgaagacagttataatataagtgttggtgacgaactgagattag agtgtcacggtataggagtacccgaaccggagatacaatggcgactgccgaataacacagtgatttcaggatcggttaca agtggcaggattgaaattcgaaacaattgtactttcattatccgatatttacgcgaaagcgatagcggtacatacacttg tgaagccgttagtgacggaaagatagatgcgagctctactgccgttattgtgaataataaacccgttagacttattcctt atggaatttccggaagttacgtcacggtcacgtggaacggcacttcaagtcgttggaccatgttgtcagggtatcagata cagtacaaagaggccaataatattgacaaaactaaagtcattccattagggcgtcatacaagacgctacactttcacaaa cctcaaaccaaggaccacatacatgttctgcattgtttatgtgttcgaagaagagctatacacggtagattgtgaaaatg tgaccacgaaagcgaaagtagatttaccgactggaatttaccgtgtggacaccaggttggtaataggggtaattataggc ttgttttccgccttcgctctgatttgttgttttgctgtcgttcggcagttccgacggaagaaggactattccgagccggc ctctcgtaaagaagagcgtgaaagtctaacggagatagctttagaggagctttatcagccatcccccacactgatgtgta catctaccacctccctcatcagagcacaagaatcatga |
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Protein
| Protein ID | pfu_aug1.0_1750.1_37102.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1750.1_37102.t1 MLRNYKYQCGCRYIFGLILIFFSFSTNETASNDSKFVWKTTCPVNCTCKKGSVRNTKYYLAKVVNCSMAGLDRAPRNLPS DTEVLDLSRNGIEHPDFQNTFLQIKFLDLSHNLLVSVDKRIRKFTKLKYLQLQNNRISGLENGIFSGLKYLSVLDLSQNH LSSIEAHAFGGLNYLQKLRLDGNRIVFLERQWFLSMPSLHWLYLSRNRISRIDGKMFETLSGLKMLKISHNNLRLLHNDS FYGLKGIRILDMSYNKLIRVPELHEMRNLLYLYLDSNPILRVSEGAFDNLNISMITLSYMSDLKVVERHAFKNLHGLVTL QIHDNVQLVYIDPEAFINCPYLKNLYLHNNQLHTISESIKDLPALTTIHFYNNRLVCDCNVLWMKQELIHEKLMNYTSVL FDDSILKCTSPPERYGMLLKEMPLDWLNKSCSPTNLPLFEDSYNISVGDELRLECHGIGVPEPEIQWRLPNNTVISGSVT SGRIEIRNNCTFIIRYLRESDSGTYTCEAVSDGKIDASSTAVIVNNKPVRLIPYGISGSYVTVTWNGTSSRWTMLSGYQI QYKEANNIDKTKVIPLGRHTRRYTFTNLKPRTTYMFCIVYVFEEELYTVDCENVTTKAKVDLPTGIYRVDTRLVIGVIIG LFSAFALICCFAVVRQFRRKKDYSEPASRKEERESLTEIALEELYQPSPTLMCTSTTSLIRAQES |
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