Gene
| Gene Model ID | pfu_aug1.0_1750.1_37103 |
|---|---|
| Locus | scaffold1750.1 : 36756 ... 49875 : - |
| To GenomeBrowser | scaffold1750.1:36756..49875 |
| Genes list of scaffold | scaffold1750.1 |
| Synonym | pfu_aug2.0_740.1_01092 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1750.1_37103.t1 | 1 | 1 | TUSC2 | 16 | 73 | 5.9e-21 | 74.6 | 4.6e-25 | 6.8e-21 | 74.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1750.1_37103.t1 | gi|126335844|ref|XP_001368277.1| | PREDICTED: tumor suppressor candidate 2 isoform X1 [Monodelphis domestica] | 2.0e-12 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 4 |
| egg-4cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1750.1_37103.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1750.1_37103.t1 atgcatacgcaatcacccgaggagtccgaacatccgaggagtcttactgcgtcaatgtactttgatgaagatggtgatct tgctcatgctttttatatagagaaaaacagtaatggctgtgccaaaatggttcagacctgggataatttatatccacaag gagaagtagatctaccccaccctcgactgaacgtagactttcctatcatattatgcgaggctcccctatcctga |
|
Protein
| Protein ID | pfu_aug1.0_1750.1_37103.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1750.1_37103.t1 MHTQSPEESEHPRSLTASMYFDEDGDLAHAFYIEKNSNGCAKMVQTWDNLYPQGEVDLPHPRLNVDFPIILCEAPLS |
|