Gene
| Gene Model ID | pfu_aug1.0_17514.1_03837 |
|---|---|
| Locus | scaffold17514.1 : 516 ... 11410 : + |
| To GenomeBrowser | scaffold17514.1:516..11410 |
| Genes list of scaffold | scaffold17514.1 |
| Synonym | pfu_aug2.0_658.1_27645 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_17514.1_03837.t1 | 1 | 1 | APG9 | 168 | 232 | 4.6e-18 | 65.2 | 1.1e-21 | 8.5e-18 | 64.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_17514.1_03837.t1 | gi|260804079|ref|XP_002596916.1| | hypothetical protein BRAFLDRAFT_134132 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_17514.1_03837.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17514.1_03837.t1 atgatggctcagtaccagactcagtatcagtctctaccgtccatggacgaggacacggacaacgatgatgtaccgaccca ggatgctgacttcatgatgcatgtagtacctgaaagcacacgctggaaccacattgagaatttggatgatttttttacac gagtttatcactatcatcagagagggggatatatttgtatggttctctgtgacgttctacaacttgtgcaatttctgttt gtggttgtattttccaccttccttatagagtgtgtggattatgatattttatttgctaacatcaaaaggaatgattctca taaggtgaccataccagagtctctgataccagactgtaccactcacatcgactttagtattgtggtttgtatactggttg ccatggttttctgggttttccgactcattaaagtagcgtacaatatcttcaagtacacagagattagatccttctatgtt tatgcattgaagatctcagcatctgagttgcccaacatgacgtggcatgaagtacaaagaagacttctagaggtacaaaa agaacagcagatgtgtatacataaacaagagctcacagaattagatatctaccacagaattctacgatttaagaactacc agatagccatggagaagaaatccatattacctctaaagtacaccgtgccgtttgttggaccgtg |
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Protein
| Protein ID | pfu_aug1.0_17514.1_03837.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17514.1_03837.t1 MMAQYQTQYQSLPSMDEDTDNDDVPTQDADFMMHVVPESTRWNHIENLDDFFTRVYHYHQRGGYICMVLCDVLQLVQFLF VVVFSTFLIECVDYDILFANIKRNDSHKVTIPESLIPDCTTHIDFSIVVCILVAMVFWVFRLIKVAYNIFKYTEIRSFYV YALKISASELPNMTWHEVQRRLLEVQKEQQMCIHKQELTELDIYHRILRFKNYQIAMEKKSILPLKYTVPFVGP |
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