Gene
| Gene Model ID | pfu_aug1.0_1755.1_00829 |
|---|---|
| Locus | scaffold1755.1 : 78746 ... 81185 : + |
| To GenomeBrowser | scaffold1755.1:78746..81185 |
| Genes list of scaffold | scaffold1755.1 |
| Synonym | pfu_aug2.0_90.1_00220 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1755.1_00829.t1 | 1 | 1 | NAD_Gly3P_dh_N | 9 | 120 | 1.0e-06 | 28.5 | 1.4e-09 | 3.1e-06 | 27.0 |
| pfu_aug1.0_1755.1_00829.t1 | 1 | 1 | Octopine_DH | 200 | 371 | 6.29996e-41 | 139.5 | 3.92364e-44 | 8.30003e-41 | 139.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1755.1_00829.t1 | gi|197690620|emb|CAH17651.2| | strombine dehydrogenase [Ostrea edulis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1755.1_00829.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1755.1_00829.t1 atgaccctggataagaaagttcagatactagtttgtggtggagggaatggtgcccactgtctagcagggttggccagctt acggccaaatgcagaggttagtgtcctaacgctatatgctgacgaggcagagcgatggacaaaggtcctggtcgacaaaa aacttaaaattagcgtcacatataacgacggaactaacggtgaattagaatccaggccaaaactcatcacgaaggatccc gcttcggttgtacccaatgctgatatcatattcatggtggtacctgcttttgcgcaccaacaatatcttacggaaattgc aaaacacatcaaagacaacacggtcatcgtgggattaccaggacaagcgggtttcgaattccaatgtttaagtattctgg gaaacaaagccaaaacatgtgctgtctcttcgtttgagtctctgccttgggcgtgtcgtattttggaatttgggtgtcat gttcaaatcttagggtttaaggaatctctgggagcagcactccttcaaggtagtcagtgcactctgtcagctccagcatt cgatacaatccaatggatccttggggagaaaccaaaaatcaaacccatacagaactatatcgcggtgaacttgatggcaa aatcaataattcatcctccgctcatgtatggtcaatggagtaaatggaacggtcagtcattggatgagaagcctctattc tatcaaggagtagatgacctgcaggcatccctactgtcaaaggtcagtgatgaagtggtggccacggccaaagcgatcga acagcagcgtagcggcatagacatgaaggatgttatacacatcctggactggtacaaagagtattatcgtgaccaggtga cagatagcagtaatctgatgaaagccatgcagacaaacaaggcgtatgacggcttgctccaccctatgaaacccgcgggg gacgggaagtacgcacccgatttctcataccgctacacggcagaggacgtaccattcggtctagtggttatgaagggcat cgctcagattgccggggtggccacgccagtcatggatgaagtgatcacgtgggcacagggcaagctgggtaaggaatacc tggttggctctgaactaaagggaaaagacctaccctcctcccgggcgccgcaaagctacaacttccataccctagatgat ttgttcaatgtatga |
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Protein
| Protein ID | pfu_aug1.0_1755.1_00829.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1755.1_00829.t1 MTLDKKVQILVCGGGNGAHCLAGLASLRPNAEVSVLTLYADEAERWTKVLVDKKLKISVTYNDGTNGELESRPKLITKDP ASVVPNADIIFMVVPAFAHQQYLTEIAKHIKDNTVIVGLPGQAGFEFQCLSILGNKAKTCAVSSFESLPWACRILEFGCH VQILGFKESLGAALLQGSQCTLSAPAFDTIQWILGEKPKIKPIQNYIAVNLMAKSIIHPPLMYGQWSKWNGQSLDEKPLF YQGVDDLQASLLSKVSDEVVATAKAIEQQRSGIDMKDVIHILDWYKEYYRDQVTDSSNLMKAMQTNKAYDGLLHPMKPAG DGKYAPDFSYRYTAEDVPFGLVVMKGIAQIAGVATPVMDEVITWAQGKLGKEYLVGSELKGKDLPSSRAPQSYNFHTLDD LFNV |
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