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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1757.1_08087
Locus scaffold1757.1 : 25476 ... 33148 : +
To GenomeBrowser scaffold1757.1:25476..33148
Genes list of scaffold scaffold1757.1
Synonym pfu_aug2.0_633.1_11025

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_1757.1_08087.t1 1 1 Peptidase_M14 18 240 0.0 181.1 0.0 0.0 180.8

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_1757.1_08087.t1 gi|350427109|ref|XP_003494655.1| 0.0

Transcript
Transcript IDpfu_aug1.0_1757.1_08087.t1
Definition-
>pfu_aug1.0_1757.1_08087.t1
atgcagtataagggattctttctttattcttttattctcttcaagctggtgtacaacaattctgatgatgacgtacaaac
gttactccgtaattttgattggtatatcgttccattggtgaatcccgatggatacgtatattcacatacaaacgacagac
tttggcgtaagaaccgaagaaaggttagggagaatgggaaatgtcatggcattgacttaaacagaaactttgatttcaac
tggaatcccggatttttgataaaaattcacatttctttacaagcgaccggtggcagtgtcaacccgtgtagtattgtatt
ttctggaccaagtgctgcctctgagaatgagacccaagcgctgcagaattttatactagcaaataaagataacatgattg
cttacttcaccatccactcgtacggacaaatgtgggtctatccatggggctttaaaacggagccaccaaaagattggcaa
gacctggacgctttagcccaaactgcagttaaagctgtaaatgaaacatatgggacagactatgtttatgggtcatccac
atcattatttgaactcatagctggatcatccgacgactgggccaaaggtggagcgagtgttaaatattcttacacagtgg
aactcagagataagggaaggaatggttttatacttccaagcgatcaaatacgaccaacaacaaaggaaacatggaatgcc
cttgttgccttttgtaaagagcttctgaagagaaacgaagcttga

Protein
Protein IDpfu_aug1.0_1757.1_08087.t1
Definition-
>pfu_aug1.0_1757.1_08087.t1
MQYKGFFLYSFILFKLVYNNSDDDVQTLLRNFDWYIVPLVNPDGYVYSHTNDRLWRKNRRKVRENGKCHGIDLNRNFDFN
WNPGFLIKIHISLQATGGSVNPCSIVFSGPSAASENETQALQNFILANKDNMIAYFTIHSYGQMWVYPWGFKTEPPKDWQ
DLDALAQTAVKAVNETYGTDYVYGSSTSLFELIAGSSDDWAKGGASVKYSYTVELRDKGRNGFILPSDQIRPTTKETWNA
LVAFCKELLKRNEA

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