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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1757.1_08088
Locus scaffold1757.1 : 48236 ... 70644 : +
To GenomeBrowser scaffold1757.1:48236..70644
Genes list of scaffold scaffold1757.1
Synonym pfu_aug2.0_3921.1_05923

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_1757.1_08088.t1 1 1 Fibrinogen_C 117 193 2.0e-10 40.6 1.9e-14 2.8e-10 40.1

Transcript
Transcript IDpfu_aug1.0_1757.1_08088.t1
Definition-
>pfu_aug1.0_1757.1_08088.t1
atggacaatgaccatatcccgatacacagtacaatatcaatttttcagaaaatcgtaaaccgaagaatacaaaatcagga
taaaacaggagcaataaccatcaaacaaaaacctccatcacataaaaagaagcgaactcccgatataggagtgagaccag
gcgaacaatatccacatttacatcatccaatcccaaaaggcattactaaattccatatttatggaacccggaaagatgac
gattaccaggatgtcgacaatgaatgcagaagaagtcccttagccgacgatgatctgaaaatcaaatgtaacataaatga
atatggaatccttgaaaaaagtatttcagactgtgggaacttacattcgacaaatatatcaagtgttggtgttggacaga
tcttaatgatcaatagccaagaaggcggttacctttactgtgatacaagttatgacagaagttattggacggtcatccaa
caaagaacaagtgttagaggaaatgatgcgtttaacagaacttgggaagaattcaaaaatggatttggatcattgaacga
tgactattggatagcgtcatttgaagaaattatgacgattttagaaattgtggactttgggacttttatccatgagggaa
caacgacgtcatttcgacgttatcagggaaaatga

Protein
Protein IDpfu_aug1.0_1757.1_08088.t1
Definition-
>pfu_aug1.0_1757.1_08088.t1
MDNDHIPIHSTISIFQKIVNRRIQNQDKTGAITIKQKPPSHKKKRTPDIGVRPGEQYPHLHHPIPKGITKFHIYGTRKDD
DYQDVDNECRRSPLADDDLKIKCNINEYGILEKSISDCGNLHSTNISSVGVGQILMINSQEGGYLYCDTSYDRSYWTVIQ
QRTSVRGNDAFNRTWEEFKNGFGSLNDDYWIASFEEIMTILEIVDFGTFIHEGTTTSFRRYQGK

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