Gene
| Gene Model ID | pfu_aug1.0_17573.1_47111 |
|---|---|
| Locus | scaffold17573.1 : 21958 ... 31816 : - |
| To GenomeBrowser | scaffold17573.1:21958..31816 |
| Genes list of scaffold | scaffold17573.1 |
| Synonym | pfu_aug2.0_2734.1_15607 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_17573.1_47111.t1 | 1 | 1 | EF-hand_7 | 10 | 52 | 8.5e-10 | 38.6 | 7.1e-13 | 9.6e-10 | 38.4 |
| pfu_aug1.0_17573.1_47111.t1 | 2 | 1 | EF-hand_1 | 10 | 19 | 6.3e-08 | 31.3 | 0.45 | 610.0 | 0.1 |
| pfu_aug1.0_17573.1_47111.t1 | 1 | 1 | EF-hand_8 | 11 | 53 | 1.9e-12 | 46.6 | 1.8e-15 | 2.4e-12 | 46.2 |
| pfu_aug1.0_17573.1_47111.t1 | 2 | 2 | EF-hand_1 | 27 | 53 | 6.3e-08 | 31.3 | 2.3e-10 | 3.1e-07 | 29.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_17573.1_47111.t1 | gi|115527|sp|P05934.1|CALM_STRPU | Calmodulin | 3.0e-11 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_17573.1_47111.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17573.1_47111.t1 gctgaacggttcacagaggagcaaatcgcagagctccgtcatctgttaacaactctaggcgaaaaactgactgatgaaga agtggaggaactactgagagaggctgatatagatggttcaggagaaatacattacgatgattttgttgccatgatgaaca ccccttcagagtga |
|
Protein
| Protein ID | pfu_aug1.0_17573.1_47111.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17573.1_47111.t1 AERFTEEQIAELRHLLTTLGEKLTDEEVEELLREADIDGSGEIHYDDFVAMMNTPSE |
|