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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_17591.1_03844
Locus scaffold17591.1 : 1 ... 5798 : +
To GenomeBrowser scaffold17591.1:1..5798
Genes list of scaffold scaffold17591.1
Synonym pfu_aug2.0_79.1_30148

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_17591.1_03844.t1 1 1 Fer2 8 88 2.3e-08 33.6 3.9e-12 2.9e-08 33.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_17591.1_03844.t1 gi|268534702|ref|XP_002632482.1| Hypothetical protein CBG13717 [Caenorhabditis briggsae] 0.0

Transcript
Transcript IDpfu_aug1.0_17591.1_03844.t1
Definition-
>pfu_aug1.0_17591.1_03844.t1
ggtaaatatagtgtttattctaaaagatggaacaaagaagcatatcaggggtaaagttggtgataatgcaatgtacttgg
cacacagatatgaaatagaaatggaaggagcttgtgaggcatcattggcatgttcaacatgtcattgttatgtgcaccac
gactacgtagacaaactacccgagccattagaagaagaagaagatatgcttgatttagcggcatttttaaaggaaaactc
aagactaggttgtcagattatactgaataaagatctggaaggcatagaactgacattacctcaagccactcggaactttt
atgtagacggtcatgtgcccacaccacactga

Protein
Protein IDpfu_aug1.0_17591.1_03844.t1
Definition-
>pfu_aug1.0_17591.1_03844.t1
VNIVFILKDGTKKHIRGKVGDNAMYLAHRYEIEMEGACEASLACSTCHCYVHHDYVDKLPEPLEEEEDMLDLAAFLKENS
RLGCQIILNKDLEGIELTLPQATRNFYVDGHVPTPH

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