Gene
| Gene Model ID | pfu_aug1.0_17652.1_11054 |
|---|---|
| Locus | scaffold17652.1 : 5296 ... 21821 : + |
| To GenomeBrowser | scaffold17652.1:5296..21821 |
| Genes list of scaffold | scaffold17652.1 |
| Synonym | pfu_aug2.0_242.1_07217 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_17652.1_11054.t1 | 1 | 1 | DUF4537 | 92 | 218 | 7.1e-07 | 29.0 | 3.9e-10 | 1.5e-06 | 28.0 |
| pfu_aug1.0_17652.1_11054.t1 | 2 | 1 | HMG_box | 608 | 676 | 3.9e-35 | 119.9 | 1.1e-20 | 3.9e-17 | 62.2 |
| pfu_aug1.0_17652.1_11054.t1 | 2 | 1 | HMG_box_2 | 609 | 668 | 2.2e-15 | 56.7 | 1.3e-10 | 4.7e-07 | 30.0 |
| pfu_aug1.0_17652.1_11054.t1 | 2 | 2 | HMG_box | 774 | 842 | 3.9e-35 | 119.9 | 1.1e-20 | 3.9e-17 | 62.2 |
| pfu_aug1.0_17652.1_11054.t1 | 2 | 2 | HMG_box_2 | 775 | 834 | 2.2e-15 | 56.7 | 1.3e-10 | 4.7e-07 | 30.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_17652.1_11054.t1 | gi|291242109|ref|XP_002740950.1| | PREDICTED: protein capicua homolog [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_17652.1_11054.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17652.1_11054.t1 atgtcaaaacgggaagactacacaagcagtctctttacgaacaaaactcctagtacgataatgtccttacctggtgcaat tcctttagttagacgagatactcaggaggagttacgcacagaaagcgtaatattgtcaccagggggcagcaccggaggaa tggaagaggaaagacgaattgctatacctccaaaaaaacgaaaaggaaatgatattgagagggaatcgttgtcacctatc aaacgtcctgtaatcgatttgagtgaatggagaaatcagcgagttttggcgagaagagacggtatgtatcaaccgggaca aatacaggatgtacggcaaaacagacacgtggcagtgctatttgacagtgataaaaatgtggtttattttaacgatgtcg ttgatcagagatcaaattttgatattataagtgacaacagcccaatggccatgatggtgactaacgggtgtaaagtttgt gtcagagtcaactctgaagaaaatttatactacgagggacgagtagttgaaaaacgttcgcagccgacaatgtattgtgt aaaaatagaaggatttcacgaacaacgtttcactgatcctcagtgggtccctcgagcagttctacgtcttatacagcctc cgtggtttgaagatttagcggaaatccctgaaactccgacgcaagagcagatgcttcccgtaccaactttgggttacact catcattcattacagcacccgaccacgcccacttcccaccaaccacatttacaccctccacagatatcccccaccctcag gcatagatttgagcgttcaccctcccttcctcagagtactggacacgacagaggcgactcttcagatgatgaaataaaaa gtgaggagttttactttgattcatcaggacttagtactccaagatcaggaagtgcaaccccagggtcagggtcaaggtca cagggtgggagtggtggcagcagacccccgcccaagaaacgtgagctgtcaaggagtcgaagtgtgcagtcgtgcgaaag cagccgttcaagcacacccaggtctccaagcacgatacagaaatataaaaaaggggacgtagtgtcaactcctaacggca tcaggaaaaaatttaacggcaagcaatggaggagactctgctctaaagagggatgtacgaaggaatcacaaagaagaggg tactgctctcggcatttgtcgatgagaggacagaaaaatatcagatcagggagtggaatgcagggtagaggggacatgaa agacggaggtcatatggaatggtcagaggggtcaacaagggagagcagcgtgactgatttcgantcccctggtccagaaa gagggcggttgccaggcaacggaccatcagccctgccctcccagattcctcattcatcaatgacgacactgaagagcctg atcaatgctcgaccaatgacaacgcagacatcacttttgacccaaggtcagtcggcagcccatgtgaccggtcatgtgac gtcgttgataaagcagcagctacagcagcaagtcccaggatcctctctgactcccatgatgcctctgtctagtgaaggta gtaaaccttcacaggctgatcagcagattccacatattcagggaatgacaccagtagatgatgacaatgatgattatgat gatgacgtttttgacagtaaagaggatgctgttcctgaggtgaaaaaagagcccaaagtgccggcaaaaagacgctctca gtctctaagtgctctcaaagaagataataaaagccctaaaaagaacaaagacaaagatcatatcagacgacctatgaatg cttttatgatcttcagcaaacgtcatcggcatttagttcaccagagacatcccaaccaagataatcgtacggttagcaag atactcggtgaatggtggtacgcactcggcccgaaggaaaaacagaaatacaacgacctggccaatcaggtcaaagaggc tcactttaaggcacatcctgaatggaaatggtgctccagagagaggaaaaaatcaggaacaatcgcggaaaaactcaaac aacgtggctcgacctctagtcgtagactcagctccacagacgatatcctagatgatgcattagcagcgccagtagatgat gacaatgatgattatgatgacgacgtttttgacagtaaagaggatgccgttcctgaggtgaaaaaagaaaccaaagtgcc ggcaaaaagacgctctcagtcactcagtgctctcaaagaagataataaaagccctaaaaagaacaaagacaaagatcata tcagacgacctatgaatgcttttatgatcttcagcaaacgtcatcggcatctggtacaccagagacatcccaaccaagat aaccgtacggttagtaagatacttggtgaatggtggtacgcacttggcccaaaggaaaaacagaaatacaacgacctggc caatcaggtcaaagaggctcactttaaggcacatcctgagtggaaatggtgctccagggagaggaaaaaatcgggaacaa tagcggaaaaactcaaacaacggggctcgacttccagtcgtagactcagttccactgacgatatcctagacgatgcatta gcagggggagataagagtgacggggacgacaaggacctgatgtgcgaggagcctggtttggatagcgacacagattcaca gacagaggaagacggactaatcgaaaacaaagcttttccgcaacaaagattctctcctgtcatgaaatctgtcagtccag gagacgtgacctttaggcctacaccaatcaaaaagcttcctgatcctaccggaagtgcagtggagggtatgacctctgac caagataaggtcaacgttcccacggcaacatctgaaaaggtcaacacgagaatgccaaacactcagcaacagactcacaa gtacgggcagatgaagatacacaatatcaccatgacgacgcccgacaatcagaagatccttctgagtaccagcacggaaa ctgttcccggaaaacagaacgggaaagggtcaaactaa |
|
Protein
| Protein ID | pfu_aug1.0_17652.1_11054.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17652.1_11054.t1 MSKREDYTSSLFTNKTPSTIMSLPGAIPLVRRDTQEELRTESVILSPGGSTGGMEEERRIAIPPKKRKGNDIERESLSPI KRPVIDLSEWRNQRVLARRDGMYQPGQIQDVRQNRHVAVLFDSDKNVVYFNDVVDQRSNFDIISDNSPMAMMVTNGCKVC VRVNSEENLYYEGRVVEKRSQPTMYCVKIEGFHEQRFTDPQWVPRAVLRLIQPPWFEDLAEIPETPTQEQMLPVPTLGYT HHSLQHPTTPTSHQPHLHPPQISPTLRHRFERSPSLPQSTGHDRGDSSDDEIKSEEFYFDSSGLSTPRSGSATPGSGSRS QGGSGGSRPPPKKRELSRSRSVQSCESSRSSTPRSPSTIQKYKKGDVVSTPNGIRKKFNGKQWRRLCSKEGCTKESQRRG YCSRHLSMRGQKNIRSGSGMQGRGDMKDGGHMEWSEGSTRESSVTDFXSPGPERGRLPGNGPSALPSQIPHSSMTTLKSL INARPMTTQTSLLTQGQSAAHVTGHVTSLIKQQLQQQVPGSSLTPMMPLSSEGSKPSQADQQIPHIQGMTPVDDDNDDYD DDVFDSKEDAVPEVKKEPKVPAKRRSQSLSALKEDNKSPKKNKDKDHIRRPMNAFMIFSKRHRHLVHQRHPNQDNRTVSK ILGEWWYALGPKEKQKYNDLANQVKEAHFKAHPEWKWCSRERKKSGTIAEKLKQRGSTSSRRLSSTDDILDDALAAPVDD DNDDYDDDVFDSKEDAVPEVKKETKVPAKRRSQSLSALKEDNKSPKKNKDKDHIRRPMNAFMIFSKRHRHLVHQRHPNQD NRTVSKILGEWWYALGPKEKQKYNDLANQVKEAHFKAHPEWKWCSRERKKSGTIAEKLKQRGSTSSRRLSSTDDILDDAL AGGDKSDGDDKDLMCEEPGLDSDTDSQTEEDGLIENKAFPQQRFSPVMKSVSPGDVTFRPTPIKKLPDPTGSAVEGMTSD QDKVNVPTATSEKVNTRMPNTQQQTHKYGQMKIHNITMTTPDNQKILLSTSTETVPGKQNGKGSN |
|