Gene
Gene Model ID | pfu_aug1.0_17692.1_47118 |
---|---|
Locus | scaffold17692.1 : 1 ... 6435 : - |
To GenomeBrowser | scaffold17692.1:1..6435 |
Genes list of scaffold | scaffold17692.1 |
Synonym | NA |
Manual annotation
Study field | other developmental genes |
---|---|
Gene name | smoothened |
Description | NCBI blastp hit to gb|AES07069.1| [Mustela putorius furo] |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_17692.1_47118.t1 | 1 | 1 | Frizzled | 84 | 122 | 9.9e-06 | 24.5 | 8.5e-10 | 1.3e-05 | 24.2 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_17692.1_47118.t1 | gi|301755274|ref|XP_002913497.1| | 8.0e-24 |
Transcript
Transcript ID | pfu_aug1.0_17692.1_47118.t1 |
---|---|
Definition | - |
>pfu_aug1.0_17692.1_47118.t1 atgcgtacagtgggacgcagccatcagaaatcaatgggtcctgggcaatttttatgcgtcagagacgcagaggctgccgt cgagtcacgtgttcagttattgattatttgggtcaacagccaggagcacacctatgaagatgatgtatcgtttaacaaga ccggccagtgtaactctccgctcgtacggacggacaaccagcagagttggtttgaggaggtggaggggtgtggcattcag tgtcagaacccactgtttactgaggcggaacatgatcaagtccatacatttatagccgtgtttggatccttctgtataat atgtacacttttcactatcgtaagtacctacatgtgtactattcaagatgccgactcggaagcttgtgcttgttttcatg tatcaaatatcaataatgcctttacaaatgtttgttga |
Protein
Protein ID | pfu_aug1.0_17692.1_47118.t1 |
---|---|
Definition | - |
>pfu_aug1.0_17692.1_47118.t1 MRTVGRSHQKSMGPGQFLCVRDAEAAVESRVQLLIIWVNSQEHTYEDDVSFNKTGQCNSPLVRTDNQQSWFEEVEGCGIQ CQNPLFTEAEHDQVHTFIAVFGSFCIICTLFTIVSTYMCTIQDADSEACACFHVSNINNAFTNVC |