Gene
| Gene Model ID | pfu_aug1.0_17692.1_47118 |
|---|---|
| Locus | scaffold17692.1 : 1 ... 6435 : - |
| To GenomeBrowser | scaffold17692.1:1..6435 |
| Genes list of scaffold | scaffold17692.1 |
| Synonym | NA |
Manual annotation
| Study field | other developmental genes |
|---|---|
| Gene name | smoothened |
| Description | NCBI blastp hit to gb|AES07069.1| [Mustela putorius furo] |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_17692.1_47118.t1 | 1 | 1 | Frizzled | 84 | 122 | 9.9e-06 | 24.5 | 8.5e-10 | 1.3e-05 | 24.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_17692.1_47118.t1 | gi|301755274|ref|XP_002913497.1| | 8.0e-24 |
Transcript
| Transcript ID | pfu_aug1.0_17692.1_47118.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17692.1_47118.t1 atgcgtacagtgggacgcagccatcagaaatcaatgggtcctgggcaatttttatgcgtcagagacgcagaggctgccgt cgagtcacgtgttcagttattgattatttgggtcaacagccaggagcacacctatgaagatgatgtatcgtttaacaaga ccggccagtgtaactctccgctcgtacggacggacaaccagcagagttggtttgaggaggtggaggggtgtggcattcag tgtcagaacccactgtttactgaggcggaacatgatcaagtccatacatttatagccgtgtttggatccttctgtataat atgtacacttttcactatcgtaagtacctacatgtgtactattcaagatgccgactcggaagcttgtgcttgttttcatg tatcaaatatcaataatgcctttacaaatgtttgttga |
|
Protein
| Protein ID | pfu_aug1.0_17692.1_47118.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17692.1_47118.t1 MRTVGRSHQKSMGPGQFLCVRDAEAAVESRVQLLIIWVNSQEHTYEDDVSFNKTGQCNSPLVRTDNQQSWFEEVEGCGIQ CQNPLFTEAEHDQVHTFIAVFGSFCIICTLFTIVSTYMCTIQDADSEACACFHVSNINNAFTNVC |
|