Gene
| Gene Model ID | pfu_aug1.0_17753.1_39991 |
|---|---|
| Locus | scaffold17753.1 : 38065 ... 40745 : - |
| To GenomeBrowser | scaffold17753.1:38065..40745 |
| Genes list of scaffold | scaffold17753.1 |
| Synonym | pfu_aug2.0_282.1_07300 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_17753.1_39991.t1 | 7 | 1 | zf-C2H2_4 | 99 | 120 | 2.4e-12 | 46.2 | 0.016 | 34.0 | 5.1 |
| pfu_aug1.0_17753.1_39991.t1 | 7 | 1 | zf-C2H2 | 99 | 120 | 7.0e-11 | 41.8 | 0.25 | 520.0 | 1.3 |
| pfu_aug1.0_17753.1_39991.t1 | 7 | 2 | zf-C2H2_4 | 137 | 155 | 2.4e-12 | 46.2 | 0.0089 | 19.0 | 5.8 |
| pfu_aug1.0_17753.1_39991.t1 | 7 | 2 | zf-C2H2 | 137 | 159 | 7.0e-11 | 41.8 | 0.0042 | 8.9 | 6.8 |
| pfu_aug1.0_17753.1_39991.t1 | 7 | 3 | zf-C2H2_4 | 201 | 220 | 2.4e-12 | 46.2 | 0.00058 | 1.2 | 9.5 |
| pfu_aug1.0_17753.1_39991.t1 | 7 | 3 | zf-C2H2 | 201 | 221 | 7.0e-11 | 41.8 | 0.0011 | 2.4 | 8.6 |
| pfu_aug1.0_17753.1_39991.t1 | 7 | 4 | zf-C2H2_4 | 314 | 334 | 2.4e-12 | 46.2 | 0.0013 | 2.7 | 8.5 |
| pfu_aug1.0_17753.1_39991.t1 | 7 | 4 | zf-C2H2 | 314 | 336 | 7.0e-11 | 41.8 | 5.2e-06 | 0.011 | 16.0 |
| pfu_aug1.0_17753.1_39991.t1 | 7 | 5 | zf-C2H2_4 | 389 | 410 | 2.4e-12 | 46.2 | 1.8e-07 | 0.00038 | 20.5 |
| pfu_aug1.0_17753.1_39991.t1 | 7 | 5 | zf-C2H2 | 389 | 410 | 7.0e-11 | 41.8 | 3.3e-06 | 0.0071 | 16.6 |
| pfu_aug1.0_17753.1_39991.t1 | 7 | 6 | zf-C2H2_4 | 648 | 667 | 2.4e-12 | 46.2 | 0.047 | 100.0 | 3.6 |
| pfu_aug1.0_17753.1_39991.t1 | 7 | 6 | zf-C2H2 | 648 | 667 | 7.0e-11 | 41.8 | 0.016 | 34.0 | 5.0 |
| pfu_aug1.0_17753.1_39991.t1 | 7 | 7 | zf-C2H2_4 | 676 | 696 | 2.4e-12 | 46.2 | 0.00027 | 0.58 | 10.6 |
| pfu_aug1.0_17753.1_39991.t1 | 7 | 7 | zf-C2H2 | 676 | 695 | 7.0e-11 | 41.8 | 0.00062 | 1.3 | 9.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_17753.1_39991.t1 | gi|350011002|dbj|GAA42707.1| | 6.0e-12 |
Transcript
| Transcript ID | pfu_aug1.0_17753.1_39991.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17753.1_39991.t1 atggagaataaagtgaaagtaaaacaagaaccagtagactatgccgagcatgtacagtcgttgttggcaaatgcgaaatc tgcatataataaccgattcgacgctgaaattgcgggagaggcacccaacggatacaagagaaaattgatttcggacataa atgacaatagatatggcaaaaagatgcgattactcgacgcggatgaacaggataaagccgaaagatacgagacgcggctt tcctcacgatctggaggtcagatcaaaaacggaagtgacactccgaatcttctgtgtttattgtgtgacgaagaattcaa atccgaaaacgaacgcatgcttcacgtgactttagtccacaaaagtaaaagcaacgcaaacaagcggacaggaatgcgta tagctagacatacgtgtcagatttgtttcgcccgatttaggacattgagggacttcttcactcacacagctggacatgcg caggatcccggattatccacgatgcagagggacatttctgacaaacttgccaagaacaccttacagcagtttttgatgaa ctcagtgtcgtctgcaggaagagatatgcttcaccctacattcaaatgcgattgctgtgacgccatattcacaaaccgag attcctacgccatgcacgtgatgatgcgagtgaaagatgattgtacaaacagcgtaaactccgcaaagaaatcaaacatc tggttggacagtgcagattcttacagcgggagcacgtctaagccagcaagcaactctccaactaaaacagatcacatgac cgggcaagacctgaaccaggcgtattatatcgacgttacaaacttggcagataaagacgaatatctacagtccgtcctgg atacaacgaaccacaaggaaaaacccgaaaacgaattgaacacttcatacggaaagaagaaatgcgctatttgttcgaaa gcgttcgcggatcaagatagtttggcaatgcacgttatgtcaaaccacgcagaggagattccttctactacgactgaagc ctgtaaacccattgtcacctctgagcagaaggtaaataaacaaaactattccattatgtacatgcacaactttccttctc ttacatctcgtaaaggccccctcaacgtacacggagaacttctgtattgcgagtactgtggcggaattttcacttctcgc gattctcttgccatgcatatgttgacgcatacagccgctgaaatgaggaaaaatagcgtcaaaattccagtagaaaatat tgcatatcaatcaaaagccgttctgctgaatcacagtatgaatctacaagaaggtaggaagctatctgttgaatccacga atgaaaaggcgacgaaaattgtatccacggccagaagttcacaagaacataatggggacagcgctatggaaaacggacat agcagttcatttgatttcggtaactggaaaagagatgctgagaaatatcaggatatccaaaaacaaagtcaatcacagat ggtcaacaataggaatgaaaacgtctttatacatcgcgaacaaataccagagtcgtattctcctgacgatcatgaagaga ccaagtcacagggcaggagaatgtaccgtagtctcagcttaccggacatgagtaggatccatagcgccgacattcccaga cctcgctccaccagtaatataggcaatgagaactatgtctatatacttaacgattcattgcttgacgataacggtgatta cggcacgacagaaagcagaacaggaagtaatttgaccaacagaaagagcgaacagagtgcacagccgaaagcagacgtga cgactgaagttcaacggaacaagtcatccgagacagtagcaacttcagcggatgaagtatcggacccctatcaattcatt catggactaaatcgtccagtttatgtgtgtaaatattgtgaaataatttttctgaatcgaacactctattatctacacaa gggactccacaatgttaataatccttggcaatgtaacatgtgtggtaaagtgtgttcgaatgtacatgacttttccgccc atgttatacatttatag |
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Protein
| Protein ID | pfu_aug1.0_17753.1_39991.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17753.1_39991.t1 MENKVKVKQEPVDYAEHVQSLLANAKSAYNNRFDAEIAGEAPNGYKRKLISDINDNRYGKKMRLLDADEQDKAERYETRL SSRSGGQIKNGSDTPNLLCLLCDEEFKSENERMLHVTLVHKSKSNANKRTGMRIARHTCQICFARFRTLRDFFTHTAGHA QDPGLSTMQRDISDKLAKNTLQQFLMNSVSSAGRDMLHPTFKCDCCDAIFTNRDSYAMHVMMRVKDDCTNSVNSAKKSNI WLDSADSYSGSTSKPASNSPTKTDHMTGQDLNQAYYIDVTNLADKDEYLQSVLDTTNHKEKPENELNTSYGKKKCAICSK AFADQDSLAMHVMSNHAEEIPSTTTEACKPIVTSEQKVNKQNYSIMYMHNFPSLTSRKGPLNVHGELLYCEYCGGIFTSR DSLAMHMLTHTAAEMRKNSVKIPVENIAYQSKAVLLNHSMNLQEGRKLSVESTNEKATKIVSTARSSQEHNGDSAMENGH SSSFDFGNWKRDAEKYQDIQKQSQSQMVNNRNENVFIHREQIPESYSPDDHEETKSQGRRMYRSLSLPDMSRIHSADIPR PRSTSNIGNENYVYILNDSLLDDNGDYGTTESRTGSNLTNRKSEQSAQPKADVTTEVQRNKSSETVATSADEVSDPYQFI HGLNRPVYVCKYCEIIFLNRTLYYLHKGLHNVNNPWQCNMCGKVCSNVHDFSAHVIHL |
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