Gene
| Gene Model ID | pfu_aug1.0_17758.1_25652 |
|---|---|
| Locus | scaffold17758.1 : 6766 ... 17913 : - |
| To GenomeBrowser | scaffold17758.1:6766..17913 |
| Genes list of scaffold | scaffold17758.1 |
| Synonym | pfu_aug2.0_1557.1_25001 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_17758.1_25652.t1 | 4 | 1 | EF-hand_1 | 18 | 45 | 9.8e-13 | 46.4 | 3.5e-07 | 0.00051 | 19.1 |
| pfu_aug1.0_17758.1_25652.t1 | 4 | 1 | EF-hand_8 | 18 | 44 | 7.8e-08 | 31.8 | 0.00048 | 0.72 | 9.5 |
| pfu_aug1.0_17758.1_25652.t1 | 2 | 1 | EF-hand_7 | 19 | 77 | 2.9e-14 | 52.9 | 2.3e-09 | 3.4e-06 | 27.1 |
| pfu_aug1.0_17758.1_25652.t1 | 4 | 1 | EF-hand_6 | 19 | 45 | 2.1e-11 | 42.7 | 1.7e-07 | 0.00025 | 20.6 |
| pfu_aug1.0_17758.1_25652.t1 | 3 | 1 | EF-hand_5 | 20 | 41 | 1.0e-08 | 34.1 | 3.0e-05 | 0.044 | 13.1 |
| pfu_aug1.0_17758.1_25652.t1 | 2 | 1 | EF-hand_9 | 21 | 63 | 2.5e-06 | 27.2 | 0.025 | 37.0 | 4.3 |
| pfu_aug1.0_17758.1_25652.t1 | 4 | 2 | EF-hand_8 | 30 | 77 | 7.8e-08 | 31.8 | 0.0002 | 0.29 | 10.7 |
| pfu_aug1.0_17758.1_25652.t1 | 4 | 2 | EF-hand_6 | 59 | 78 | 2.1e-11 | 42.7 | 0.71 | 1100.0 | 0.0 |
| pfu_aug1.0_17758.1_25652.t1 | 4 | 2 | EF-hand_1 | 67 | 78 | 9.8e-13 | 46.4 | 0.79 | 1200.0 | -0.8 |
| pfu_aug1.0_17758.1_25652.t1 | 4 | 3 | EF-hand_8 | 116 | 142 | 7.8e-08 | 31.8 | 1.0e-05 | 0.015 | 14.9 |
| pfu_aug1.0_17758.1_25652.t1 | 2 | 2 | EF-hand_7 | 118 | 176 | 2.9e-14 | 52.9 | 1.0e-10 | 1.5e-07 | 31.4 |
| pfu_aug1.0_17758.1_25652.t1 | 4 | 3 | EF-hand_1 | 119 | 144 | 9.8e-13 | 46.4 | 7.0e-06 | 0.01 | 15.0 |
| pfu_aug1.0_17758.1_25652.t1 | 4 | 3 | EF-hand_6 | 119 | 143 | 2.1e-11 | 42.7 | 4.2e-06 | 0.0062 | 16.3 |
| pfu_aug1.0_17758.1_25652.t1 | 2 | 2 | EF-hand_9 | 119 | 179 | 2.5e-06 | 27.2 | 1.2e-07 | 0.00018 | 21.3 |
| pfu_aug1.0_17758.1_25652.t1 | 3 | 2 | EF-hand_5 | 120 | 135 | 1.0e-08 | 34.1 | 0.0013 | 1.9 | 7.9 |
| pfu_aug1.0_17758.1_25652.t1 | 4 | 4 | EF-hand_8 | 139 | 171 | 7.8e-08 | 31.8 | 6.7e-06 | 0.01 | 15.4 |
| pfu_aug1.0_17758.1_25652.t1 | 4 | 4 | EF-hand_1 | 153 | 179 | 9.8e-13 | 46.4 | 7.0e-08 | 0.0001 | 21.3 |
| pfu_aug1.0_17758.1_25652.t1 | 3 | 3 | EF-hand_5 | 158 | 177 | 1.0e-08 | 34.1 | 2.2e-06 | 0.0033 | 16.6 |
| pfu_aug1.0_17758.1_25652.t1 | 4 | 4 | EF-hand_6 | 160 | 179 | 2.1e-11 | 42.7 | 2.5e-05 | 0.038 | 13.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_17758.1_25652.t1 | gi|326437465|gb|EGD83035.1| | 7.0e-11 |
Transcript
| Transcript ID | pfu_aug1.0_17758.1_25652.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17758.1_25652.t1 gtggagacgccgtttgatagagtgtacctcagatcgaagaaacagcaattggacattgacgatgtgtttttcctcgctga cgacgacgaagacggcttcctagactatgatgagttgaagaaagctttagaggccataggccacaaaatgcgaacgcaag aactgagcgacttacttgatgagttttctcatggacatgagggacatataaatcagacgcagttccgtgctttggtggga tataaattcgccaaacgatgtgggatccacagcaatttcgtagccttgaaagctttatttaaaagttacaaaggcaaagg ctcggaagcaacagaaagaaacggtgacgtttttactctcttcaaaatgtttgactatgatcggaaagggcacgttagta agaagaaactgaaagaaggcttcaaaaaattaacagggtcagaaatagcagatgatgacctggatgtgatgatggaacaa gcagatgagaacggagacggacatattgatatctatgatttcgagagagttctcaataccaattacttcccagacgagga ttaa |
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Protein
| Protein ID | pfu_aug1.0_17758.1_25652.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17758.1_25652.t1 VETPFDRVYLRSKKQQLDIDDVFFLADDDEDGFLDYDELKKALEAIGHKMRTQELSDLLDEFSHGHEGHINQTQFRALVG YKFAKRCGIHSNFVALKALFKSYKGKGSEATERNGDVFTLFKMFDYDRKGHVSKKKLKEGFKKLTGSEIADDDLDVMMEQ ADENGDGHIDIYDFERVLNTNYFPDED |
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