Gene
| Gene Model ID | pfu_aug1.0_1777.1_08112 |
|---|---|
| Locus | scaffold1777.1 : 57326 ... 72603 : + |
| To GenomeBrowser | scaffold1777.1:57326..72603 |
| Genes list of scaffold | scaffold1777.1 |
| Synonym | pfu_aug2.0_99.1_30196 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1777.1_08112.t1 | 1 | 1 | SARA | 31 | 67 | 6.5e-16 | 57.9 | 1.8e-19 | 1.3e-15 | 56.9 |
| pfu_aug1.0_1777.1_08112.t1 | 2 | 1 | DUF3480 | 137 | 199 | 4.1e-36 | 124.3 | 2.6e-33 | 1.9e-29 | 102.3 |
| pfu_aug1.0_1777.1_08112.t1 | 2 | 2 | DUF3480 | 197 | 226 | 4.1e-36 | 124.3 | 2.3e-09 | 1.7e-05 | 23.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1777.1_08112.t1 | gi|115757182|ref|XP_781105.2| | 2.0e-23 |
Transcript
| Transcript ID | pfu_aug1.0_1777.1_08112.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1777.1_08112.t1 atgggcaatgaaggaaacgattcttatcttgatgaaggaaaatgtacaagactcgcgtctaaagacgcggaaatctcaag tcgaactggtcgcggcccgcatcccaataatcccagtgattactgttcaaccattcctccttcgcagcaagcctcgatca cacctctgtcaccccccacagtcatggtacctgtcggggttctcaaacgagaggctcacctggtggaagtagaggggggc ttatgccatggccctgtcatcagcgtctgcgtctgcactatagttaagcaaaatgggactggtccattcccaccaaacta caagtcctacatcatccaaacttgcatggatgatgcatctgaggatgcttactatgatgcatgattatcattatctaaca tttcagactatccctgtccattgatcagtgttaggaacaggaagccggtgttctttgagatcggtcacaccattatgaat ctgctggcagatttccgtaattatcagtacatgttaccccaaataaagggtgtgtcaatacacatggaggacaagaagac ctgtatcaacttccctaggaatagatatgatgatgttggctatgaagttggtgccaatgaagagagattaccagacacgt atatgaacgatctagataatgaactgattcctgttatccatagtgcagcatcacaaaaccatggtggatccattatccta gaactcgtctttcatgttttagattag |
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Protein
| Protein ID | pfu_aug1.0_1777.1_08112.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1777.1_08112.t1 MGNEGNDSYLDEGKCTRLASKDAEISSRTGRGPHPNNPSDYCSTIPPSQQASITPLSPPTVMVPVGVLKREAHLVEVEGG LCHGPVISVCVCTIVKQNGTGPFPPNYKSYIIQTCMDDASEDAYYDAXLSLSNISDYPCPLISVRNRKPVFFEIGHTIMN LLADFRNYQYMLPQIKGVSIHMEDKKTCINFPRNRYDDVGYEVGANEERLPDTYMNDLDNELIPVIHSAASQNHGGSIIL ELVFHVLD |
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