Gene
| Gene Model ID | pfu_aug1.0_17794.1_47128 |
|---|---|
| Locus | scaffold17794.1 : 452 ... 20115 : - |
| To GenomeBrowser | scaffold17794.1:452..20115 |
| Genes list of scaffold | scaffold17794.1 |
| Synonym | pfu_aug2.0_125.1_16965 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_17794.1_47128.t1 | 2 | 1 | Prominin | 28 | 106 | 2.0e-40 | 138.1 | 7.9e-23 | 5.8e-19 | 67.1 |
| pfu_aug1.0_17794.1_47128.t1 | 2 | 2 | Prominin | 106 | 256 | 2.0e-40 | 138.1 | 5.9e-26 | 4.4e-22 | 77.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_17794.1_47128.t1 | gi|198421222|ref|XP_002120841.1| | 3.0e-13 |
Transcript
| Transcript ID | pfu_aug1.0_17794.1_47128.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17794.1_47128.t1 atgaatgtggtcgggcataatttcttcatgcattgttggacaaacttcaaagatacaattgacaaagcattgaatggaac actgatcagtgatgttacaacaaattacatgatttatctgagacagtttggaggatatggagcctgtatcatcattggtt tcctcttcatcttcctctttcctatcatcggtttctgcttctgttgttgtcgatgttgtggtaactgtggaggaaaaatg gaacagaacaaatctgatgccggagctcacatcaagagacgaatcttcgcatgcatcttgtttgtactcattgcatttac actgtcagttggatttgtatttattttctcatggctgttgatgttgctgaccaccttgacgtttataattggagctccac tagagaagtttctgtgtaagacactgacatctccagatatgtccgatctggacgagcttgttgatgaaaggatatttaag ataatgtatccggacagagactctggtacactgctgggagtggctatctttggcaatgacacagtggacctgaaatttac acaaatgttacaggattgccaagctggtaaagcagcatacgtagccttcaaactcgataatctgtttgacatcagtaatt ttatcaactatacaaatctgaataagaatgcgacagatcaggatcttgtagacttggcaaaccagttagatacagcagca agcgctgcctctggtataacgaagacaaatctggaagctctcagagatcggacattggccatcaacaacacagagtatgc taatgtgatgacagctatggttagttag |
|
Protein
| Protein ID | pfu_aug1.0_17794.1_47128.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17794.1_47128.t1 MNVVGHNFFMHCWTNFKDTIDKALNGTLISDVTTNYMIYLRQFGGYGACIIIGFLFIFLFPIIGFCFCCCRCCGNCGGKM EQNKSDAGAHIKRRIFACILFVLIAFTLSVGFVFIFSWLLMLLTTLTFIIGAPLEKFLCKTLTSPDMSDLDELVDERIFK IMYPDRDSGTLLGVAIFGNDTVDLKFTQMLQDCQAGKAAYVAFKLDNLFDISNFINYTNLNKNATDQDLVDLANQLDTAA SAASGITKTNLEALRDRTLAINNTEYANVMTAMVS |
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