Gene
| Gene Model ID | pfu_aug1.0_17794.1_47129 |
|---|---|
| Locus | scaffold17794.1 : 21518 ... 32743 : - |
| To GenomeBrowser | scaffold17794.1:21518..32743 |
| Genes list of scaffold | scaffold17794.1 |
| Synonym | pfu_aug2.0_125.1_16966 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_17794.1_47129.t1 | 1 | 1 | Helicase_C | 74 | 150 | 8.1e-29 | 99.3 | 8.6e-32 | 2.1e-28 | 97.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_17794.1_47129.t1 | gi|193683780|ref|XP_001952119.1| | PREDICTED: ATP-dependent RNA helicase abstrakt [Acyrthosiphon pisum] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| mantle | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_17794.1_47129.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17794.1_47129.t1 atgcctaagaaaatccagaactttgcccgtagtgcattggtcaaacctgtgacagtcaacgtaggtcgtgcaggagctgc tagtcttgatattaaacaggaagtggagtacgtcaaacaggaagctaagatggtgtatatactggaatgtctacagaaga cagcgccacctgtgctgatatttgccgagaagaaacaagatgttgatgccatacatgaatacttgttactgaagggagta gatgctgtggccattcatggaggaaaagatcaagaagaaagaacgagatctgtcagtcagtttaagaatggagagaagga tgtgttggtagctacagatgtcgcttctaaaggtctcgacttccctgaaatccaacatgttatcaactatgatatgcctg aagatatagaaaactatgtgcatagaataggaagaacgggacgatgtggtaaaactggagtggccactacattcataaac aaaggagtggatgaatcgattctgttggatctgaaacatttactgatagaggccaaacaacttgttcctccattccttgc caagatgcagtctgacagtgaaaaatacctcaacatcgggggtgaagtgggatgctcatactgcggtggtttgggtcatc gaatcgcagactgtccgaaactggaggccattcagaccaagcaggcgcagagcatcgggcgcagagactatttagcgcac agcagcgcggattactga |
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Protein
| Protein ID | pfu_aug1.0_17794.1_47129.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17794.1_47129.t1 MPKKIQNFARSALVKPVTVNVGRAGAASLDIKQEVEYVKQEAKMVYILECLQKTAPPVLIFAEKKQDVDAIHEYLLLKGV DAVAIHGGKDQEERTRSVSQFKNGEKDVLVATDVASKGLDFPEIQHVINYDMPEDIENYVHRIGRTGRCGKTGVATTFIN KGVDESILLDLKHLLIEAKQLVPPFLAKMQSDSEKYLNIGGEVGCSYCGGLGHRIADCPKLEAIQTKQAQSIGRRDYLAH SSADY |
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