Gene
| Gene Model ID | pfu_aug1.0_178.1_36340 |
|---|---|
| Locus | scaffold178.1 : 3936 ... 11389 : + |
| To GenomeBrowser | scaffold178.1:3936..11389 |
| Genes list of scaffold | scaffold178.1 |
| Synonym | pfu_aug2.0_14.1_13395 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_178.1_36340.t1 | 3 | 1 | HEAT_2 | 3 | 51 | 2.7e-27 | 94.8 | 3.2e-10 | 6.8e-07 | 29.4 |
| pfu_aug1.0_178.1_36340.t1 | 5 | 1 | HEAT_PBS | 5 | 16 | 7.7e-21 | 72.4 | 0.11 | 240.0 | 2.6 |
| pfu_aug1.0_178.1_36340.t1 | 4 | 1 | HEAT | 7 | 35 | 1.1e-09 | 37.5 | 2.8e-05 | 0.06 | 13.4 |
| pfu_aug1.0_178.1_36340.t1 | 5 | 2 | HEAT_PBS | 23 | 47 | 7.7e-21 | 72.4 | 1.0e-05 | 0.022 | 15.1 |
| pfu_aug1.0_178.1_36340.t1 | 4 | 2 | HEAT | 40 | 63 | 1.1e-09 | 37.5 | 0.046 | 97.0 | 3.4 |
| pfu_aug1.0_178.1_36340.t1 | 3 | 2 | HEAT_2 | 113 | 172 | 2.7e-27 | 94.8 | 3.4e-09 | 7.2e-06 | 26.2 |
| pfu_aug1.0_178.1_36340.t1 | 5 | 3 | HEAT_PBS | 114 | 135 | 7.7e-21 | 72.4 | 0.00011 | 0.24 | 11.9 |
| pfu_aug1.0_178.1_36340.t1 | 3 | 3 | HEAT_2 | 141 | 216 | 2.7e-27 | 94.8 | 1.3e-16 | 2.7e-13 | 50.0 |
| pfu_aug1.0_178.1_36340.t1 | 5 | 4 | HEAT_PBS | 145 | 170 | 7.7e-21 | 72.4 | 4.7e-07 | 0.00099 | 19.3 |
| pfu_aug1.0_178.1_36340.t1 | 4 | 3 | HEAT | 164 | 189 | 1.1e-09 | 37.5 | 6.4e-05 | 0.14 | 12.3 |
| pfu_aug1.0_178.1_36340.t1 | 5 | 5 | HEAT_PBS | 177 | 203 | 7.7e-21 | 72.4 | 3.6e-06 | 0.0077 | 16.6 |
| pfu_aug1.0_178.1_36340.t1 | 4 | 4 | HEAT | 196 | 216 | 1.1e-09 | 37.5 | 0.12 | 250.0 | 2.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_178.1_36340.t1 | gi|291222709|ref|XP_002731354.1| | PREDICTED: deoxyhypusine hydroxylase-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_178.1_36340.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_178.1_36340.t1 atgcaaaatgattatgcaataccaactctgacaaatgtattgaaggatgaaaatcaagagccaatggttcggcatgaagc tggtgaagccttgggagctataggatctctaacctctttacctgtccttaaagaatacaccaaggatcctgtgatcgagg tgtcggagacatgtcagttagcagtggagaggattgaatggctaaacaatcctgatcgtcattccgagaagttgaccagc aatccttatctctctgtcgacccggcaccccctaacgaggagcaaacgccagagaaactggaaagggttctattagatga aactctaccactgtttcagagatatagagccatgttttcacttcggaacttaggcaccacagaagctgtcaaagttcttg cattagggcttagatgtcgtagtgctttgtttaggcatgagattgcctatgttctaggtcagattcagagtgatgcatgt attgaagaactcaaggataatctcaaagatgtaaacgaaaatcccatggtacgacacgagtgtgcggaagctctcggttc tatagccacagacgagtgcaccaagatactagaggagtatctgaaggacagtgaacgtgttgtaaaggagagttgtatag tggcactggacatgagtgaatatgaaaacagtggacagtttcagtatgcagacggacttcagaaagttaaagatatcaaa gagggacatgttacacatatagaaaactga |
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Protein
| Protein ID | pfu_aug1.0_178.1_36340.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_178.1_36340.t1 MQNDYAIPTLTNVLKDENQEPMVRHEAGEALGAIGSLTSLPVLKEYTKDPVIEVSETCQLAVERIEWLNNPDRHSEKLTS NPYLSVDPAPPNEEQTPEKLERVLLDETLPLFQRYRAMFSLRNLGTTEAVKVLALGLRCRSALFRHEIAYVLGQIQSDAC IEELKDNLKDVNENPMVRHECAEALGSIATDECTKILEEYLKDSERVVKESCIVALDMSEYENSGQFQYADGLQKVKDIK EGHVTHIEN |
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