Gene
| Gene Model ID | pfu_aug1.0_1782.1_51416 |
|---|---|
| Locus | scaffold1782.1 : 27566 ... 35772 : + |
| To GenomeBrowser | scaffold1782.1:27566..35772 |
| Genes list of scaffold | scaffold1782.1 |
| Synonym | pfu_aug2.0_81.1_03568 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1782.1_51416.t1 | 1 | 1 | EBP | 30 | 146 | 7.1e-11 | 41.4 | 1.2e-14 | 8.6e-11 | 41.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1782.1_51416.t1 | gi|156386164|ref|XP_001633783.1| | predicted protein [Nematostella vectensis] | 7.0e-15 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1782.1_51416.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1782.1_51416.t1 atgaacttttttgtgtcttgtcatttttttcatcgtcggaagcccacgacatcttctccgttctactacgtaagatgcag ggcagataaatactatgtggtgatagacttaagatatcctgacatctcagatgtttacgtctttgctcaaagcttgttga attatgttgaagttttgcttaatatcgtaacaataataatgcactacaagcataaccgtcatactattatcatggcgttt acggtgacggtgatgacgttttggaagacggtgctatatttcatgatgttcatgagttttacaggagggagggacaggat aggtgctacgtccctgccccaagagattttattattccatgtccccaatggtttctggatagttgtaccatttttggtta tggtcaaattatggccaagtctgactaatagtagcgaagaagaagtagtaaaagttacacgtagaactcgcaggaagaat gagtga |
|
Protein
| Protein ID | pfu_aug1.0_1782.1_51416.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1782.1_51416.t1 MNFFVSCHFFHRRKPTTSSPFYYVRCRADKYYVVIDLRYPDISDVYVFAQSLLNYVEVLLNIVTIIMHYKHNRHTIIMAF TVTVMTFWKTVLYFMMFMSFTGGRDRIGATSLPQEILLFHVPNGFWIVVPFLVMVKLWPSLTNSSEEEVVKVTRRTRRKN E |
|