Gene
| Gene Model ID | pfu_aug1.0_17830.1_32857 |
|---|---|
| Locus | scaffold17830.1 : 1 ... 20605 : + |
| To GenomeBrowser | scaffold17830.1:1..20605 |
| Genes list of scaffold | scaffold17830.1 |
| Synonym | pfu_aug2.0_441.1_04177 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_17830.1_32857.t1 | 2 | 1 | Band_7 | 3 | 140 | 2.8e-25 | 89.2 | 1.9e-25 | 6.9e-22 | 78.2 |
| pfu_aug1.0_17830.1_32857.t1 | 2 | 2 | Band_7 | 181 | 220 | 2.8e-25 | 89.2 | 4.5e-06 | 0.017 | 15.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_17830.1_32857.t1 | gi|349917330|dbj|GAA28157.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_17830.1_32857.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17830.1_32857.t1 gtatgatattcattctgccgtgtgtggatgaaatgatcaaagtagatttacgaacactctcacatgatgtaccaagacaa gagattctgacgaaggactctgtgactgtagccgtagatgctgtagtgtattacagggtacaggatcctgtaatgtccgt ctgtaacgtcaatgacgcctttagatccacccatctactggctgctaccacactcagaaacgtcctcggtatgaaactaa tgacggagatcctagctgaaagggaggagatagcaaacactatgcagggtatgctagacgaggctacggatgattgggga ataaaagtagaacgggtcgaagtaaaagacgtacgattaccactccagctacaaagagcaatggcggcggaagccgaggc aactcgagaggcaaaagcaaaggattatgtggatgtatccttatgttcttctctgttctcatcatcatccttttcttccc cttctcgttatgcttcaccattaagggacttcttgatgaggcaacagatccatgggggatcaaaagtggagagagtcgaa atcaaagacgtgagacttcctatccagttacagagagctatggctgctgaagcagaggcaactcgagaggctagagctaa ggtggtagctgcagaaggagaacagaaagcgtcacgtgctctgaaggaggccgctgacgtcatcatggagtccccggccg ccatgcagctccgatatctacagaccctgggaatggtggccgccgagaagaattctacaatcattttcccgctccccatc gatatgatgaaggcattcatgaaaaagtag |
|
Protein
| Protein ID | pfu_aug1.0_17830.1_32857.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17830.1_32857.t1 MIFILPCVDEMIKVDLRTLSHDVPRQEILTKDSVTVAVDAVVYYRVQDPVMSVCNVNDAFRSTHLLAATTLRNVLGMKLM TEILAEREEIANTMQGMLDEATDDWGIKVERVEVKDVRLPLQLQRAMAAEAEATREAKAKDYVDVSLCSSLFSSSSFSSP SRYASPLRDFLMRQQIHGGSKVERVEIKDVRLPIQLQRAMAAEAEATREARAKVVAAEGEQKASRALKEAADVIMESPAA MQLRYLQTLGMVAAEKNSTIIFPLPIDMMKAFMKK |
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