Gene
| Gene Model ID | pfu_aug1.0_1784.1_08116 |
|---|---|
| Locus | scaffold1784.1 : 44477 ... 59265 : - |
| To GenomeBrowser | scaffold1784.1:44477..59265 |
| Genes list of scaffold | scaffold1784.1 |
| Synonym | pfu_aug2.0_35.1_16744 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1784.1_08116.t1 | 4 | 1 | Cache_1 | 78 | 155 | 3.0e-40 | 135.6 | 2.4e-20 | 7.0e-17 | 60.7 |
| pfu_aug1.0_1784.1_08116.t1 | 4 | 2 | Cache_1 | 402 | 494 | 3.0e-40 | 135.6 | 0.0034 | 10.0 | 5.7 |
| pfu_aug1.0_1784.1_08116.t1 | 4 | 3 | Cache_1 | 577 | 654 | 3.0e-40 | 135.6 | 2.4e-20 | 7.0e-17 | 60.7 |
| pfu_aug1.0_1784.1_08116.t1 | 4 | 4 | Cache_1 | 901 | 923 | 3.0e-40 | 135.6 | 0.026 | 77.0 | 2.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1784.1_08116.t1 | gi|291231076|ref|XP_002735490.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_1784.1_08116.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1784.1_08116.t1 atgtcagtccatcattgtattcgctacagacggactagatacggacggagagagcatcaggctcgcatctttagttacct cataaaggaggacgctgaggtgttcccggggaagctcgcttgtacccacagaggtagctttgtcaaactgtccacggggg agaatcttatcttccagatgcggaactactttgatttcctgtcctcaattgctaagagcacggagcccctgtggacctca ccctacatagacgcctggggactggggatcatggtgacgtatgcaataccggtactcagtaaggacggaaagacgatagg cgtggtgggcgtggacgccactttagatcagatagagaatttcttaactaaacatcagtgggggaacgtgtattcattcc tgatcaatacagaaggagaaacaatattccatccaaaattaaagccaagtactaatttactagaagatcctatatttatt ccaatatcgcaacttgaaaatcaacaaccaaaagagttctcaattatagaaatagaaatgaaagaaaggaaaaacaacca caagtttattgagggaaaagatggaaagagtaagagttatttctatgcagctttgaatgagtcagagtattcatttgcct atgttcttcaagacaccgacaaggaattccgtcgatcacaagagccgaccactcgcccaccaaacaccaaaagttactac aatctccttaaggaatatcagagtcctgtggtcaggagaagattcccacacgccgtcaaggaactggacatcaaggaaaa cgagactttatacccaggactgaccgtcagctacgagcattctacaatcttcctggcgccaaagtcacactgtgatccaa tcaaatatctgtatgacgacaacttggcagagaagaccatcaacgctcatgattggatgaattcatacgaacctgacctg ggatgtgaagatgatactcagctgtatgacaaaggcgttagagccgatgtatggataactcagcctattcaagaaatatg gaaaagaagaaagtttgaatctttgagtcaagtaaaatggacaaatattggactcaggagtggtgttttcaggacttatc cggggcacaggtcaaaacgaggctatgatcctacaaagcgtccttggtacaaaaggacaagcagtgagccatggaagaca tcaatctccacaccctatatggacgccgctggggtgggaaagatcaacaccatctcccaggctgtgtttgagggtatgac tccacggtctgacgaagactgtgccaacctcacgaagccttacccagggggatgtacgtgtgatctagacaaggactgca agagcagggtatgttacctgagtgacgctccgggtcctaattctgatcagcgtcgctgtgctacggaacgtgtggaggga gttacaggccttgacattctgtatgacgacttccaaaataaaactatggagagcatgcaggccagtgactttatcaagtc ctgtggactcaagtaccgctgtccggactgggaagcagattgtgaaactagttacctcataaaggaggacgctgaggtgt tcccggggaagctcgcctgtacccacagagggagctttgtcaaactgtccacgggggagaatcttatcttccagatgcgg aactactttgatttcctgtcctcaattgctaagagcacggagcccctgtggacctcaccctacatagacgcctggggact ggggatcatggtgacgtatgccataccggtactcagtaaggacggaaagacgataggggtggtgggcgtggacgccactt tagatcagatagagaatttcttaactaaacatcagtgggggaacgtgtattcattcctgatcaatacagaaggagaaaca atattccatccaaaattaaagccaagtactaatttactagaagatcctatatttattccaatatcgcaacttgaaaatca acaaccaaaggagttctcaattatagaaatagaaatgaaagaaaggaaaaacaaccacaagtttattgagggaaaagatg gaaagagtaagagttatttctatgcagctttgaatgagtcagagtattcatttgcctatgttcttcaggacaccgacaag gaattccgtcgatcacaagagccgaccactcgcccaccaaacaccaaaagttactacaatctcctcaaggaatatcagag tcctgtggttagaaggaggttcccacacgccgtcaaggaactggacatcaaggaaaacgagaccctatacccaggactga ccgtcagctacgagcattctacaatcttcctggcgccaaagtcacactgtgatccaatcaaatatctgtatgacgacaac ttggcagagaagaccatcaacgctcatgattggatgaattcatacgaacctgacttgggatgtgaagacgatactcagct gtatgacaaaggagttagagccgatgtatggataactcagcctattcaagaaatatggaaaagaagaaagtttgaatctt tgagtcaagtaaaatggacaaatattggactcaggagtggtgtattcagaacctatccggggcacaggtcaaaacgaggc tatgatcctaccaagcgtccttggtataagaggaccagcagtgagccatggaagacatcaatctccacaccctatatgga cgccgctggggtgggaaagatcaacaccatctcccaggctgtgtttgagggtatgaccccacggtctgacgaagactgcg ccaacctcacgaagccctacccagggggttgtacgtgtgatctagacaaggactgcaagagcagccctagtggtatgatc actgggaacgtgtctggaccctgtatgtctggattctactatgtgacgtcattgccaaagacaaatctatatctactagt catagaaaactggagagcattcagggctagtctgttctataactttaactgtaagataacacgaagtattgtgaactctg gtgcttacagaattataaatggcacgtgtgctcatgatgaccaatcaacgagcaccttggccgccgacaacaaatgtccc gtgctaagagaactagaaatgccatgtacatttactacagcatcaacgaatcatgtatctatgtttctcatcgcgacatt actcattttattccttgtaaataggtag |
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Protein
| Protein ID | pfu_aug1.0_1784.1_08116.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1784.1_08116.t1 MSVHHCIRYRRTRYGRREHQARIFSYLIKEDAEVFPGKLACTHRGSFVKLSTGENLIFQMRNYFDFLSSIAKSTEPLWTS PYIDAWGLGIMVTYAIPVLSKDGKTIGVVGVDATLDQIENFLTKHQWGNVYSFLINTEGETIFHPKLKPSTNLLEDPIFI PISQLENQQPKEFSIIEIEMKERKNNHKFIEGKDGKSKSYFYAALNESEYSFAYVLQDTDKEFRRSQEPTTRPPNTKSYY NLLKEYQSPVVRRRFPHAVKELDIKENETLYPGLTVSYEHSTIFLAPKSHCDPIKYLYDDNLAEKTINAHDWMNSYEPDL GCEDDTQLYDKGVRADVWITQPIQEIWKRRKFESLSQVKWTNIGLRSGVFRTYPGHRSKRGYDPTKRPWYKRTSSEPWKT SISTPYMDAAGVGKINTISQAVFEGMTPRSDEDCANLTKPYPGGCTCDLDKDCKSRVCYLSDAPGPNSDQRRCATERVEG VTGLDILYDDFQNKTMESMQASDFIKSCGLKYRCPDWEADCETSYLIKEDAEVFPGKLACTHRGSFVKLSTGENLIFQMR NYFDFLSSIAKSTEPLWTSPYIDAWGLGIMVTYAIPVLSKDGKTIGVVGVDATLDQIENFLTKHQWGNVYSFLINTEGET IFHPKLKPSTNLLEDPIFIPISQLENQQPKEFSIIEIEMKERKNNHKFIEGKDGKSKSYFYAALNESEYSFAYVLQDTDK EFRRSQEPTTRPPNTKSYYNLLKEYQSPVVRRRFPHAVKELDIKENETLYPGLTVSYEHSTIFLAPKSHCDPIKYLYDDN LAEKTINAHDWMNSYEPDLGCEDDTQLYDKGVRADVWITQPIQEIWKRRKFESLSQVKWTNIGLRSGVFRTYPGHRSKRG YDPTKRPWYKRTSSEPWKTSISTPYMDAAGVGKINTISQAVFEGMTPRSDEDCANLTKPYPGGCTCDLDKDCKSSPSGMI TGNVSGPCMSGFYYVTSLPKTNLYLLVIENWRAFRASLFYNFNCKITRSIVNSGAYRIINGTCAHDDQSTSTLAADNKCP VLRELEMPCTFTTASTNHVSMFLIATLLILFLVNR |
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