Gene
| Gene Model ID | pfu_aug1.0_1784.1_08117 |
|---|---|
| Locus | scaffold1784.1 : 60305 ... 73745 : - |
| To GenomeBrowser | scaffold1784.1:60305..73745 |
| Genes list of scaffold | scaffold1784.1 |
| Synonym | pfu_aug2.0_11950.1_03108 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1784.1_08117.t1 | 2 | 1 | EF-hand_7 | 59 | 118 | 8.7e-22 | 77.0 | 5.9e-16 | 8.0e-13 | 48.3 |
| pfu_aug1.0_1784.1_08117.t1 | 3 | 1 | EF-hand_1 | 61 | 85 | 1.5e-18 | 64.5 | 6.2e-08 | 8.3e-05 | 21.6 |
| pfu_aug1.0_1784.1_08117.t1 | 3 | 1 | EF-hand_6 | 61 | 85 | 4.5e-18 | 63.4 | 1.7e-07 | 0.00023 | 20.7 |
| pfu_aug1.0_1784.1_08117.t1 | 3 | 1 | EF-hand_5 | 62 | 81 | 5.0e-12 | 44.5 | 8.9e-05 | 0.12 | 11.7 |
| pfu_aug1.0_1784.1_08117.t1 | 3 | 1 | EF-hand_8 | 62 | 85 | 4.7e-10 | 38.9 | 0.00045 | 0.61 | 9.7 |
| pfu_aug1.0_1784.1_08117.t1 | 3 | 2 | EF-hand_8 | 73 | 120 | 4.7e-10 | 38.9 | 4.7e-12 | 6.3e-09 | 35.3 |
| pfu_aug1.0_1784.1_08117.t1 | 3 | 2 | EF-hand_1 | 95 | 120 | 1.5e-18 | 64.5 | 3.5e-10 | 4.8e-07 | 28.6 |
| pfu_aug1.0_1784.1_08117.t1 | 3 | 2 | EF-hand_6 | 95 | 120 | 4.5e-18 | 63.4 | 9.4e-09 | 1.3e-05 | 24.6 |
| pfu_aug1.0_1784.1_08117.t1 | 3 | 2 | EF-hand_5 | 95 | 115 | 5.0e-12 | 44.5 | 1.5e-07 | 0.00021 | 20.4 |
| pfu_aug1.0_1784.1_08117.t1 | 2 | 2 | EF-hand_7 | 97 | 153 | 8.7e-22 | 77.0 | 3.8e-13 | 5.2e-10 | 39.3 |
| pfu_aug1.0_1784.1_08117.t1 | 3 | 3 | EF-hand_1 | 131 | 152 | 1.5e-18 | 64.5 | 8.6e-06 | 0.012 | 14.9 |
| pfu_aug1.0_1784.1_08117.t1 | 3 | 3 | EF-hand_6 | 132 | 153 | 4.5e-18 | 63.4 | 1.5e-06 | 0.002 | 17.8 |
| pfu_aug1.0_1784.1_08117.t1 | 3 | 3 | EF-hand_5 | 132 | 152 | 5.0e-12 | 44.5 | 8.1e-06 | 0.011 | 15.0 |
| pfu_aug1.0_1784.1_08117.t1 | 3 | 3 | EF-hand_8 | 137 | 150 | 4.7e-10 | 38.9 | 0.14 | 180.0 | 1.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1784.1_08117.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1784.1_08117.t1 atgattgttctgtatttcactggtatttcaagctggacatacaccatggcgttctttggaaacgacgatgaacagaacag acagacctatcaccaaaggatggaatcaacatccaatcctatagagaaactgagatatgcttgtctgaagaggggggcta gcggcatcaaggggctgggcaggattttccgtatcatggacaaagacagaagtcatactttaagtaaagatgagctgaag aacggactccaaaaatacggaataaatctggatgatcaaacgatgcaggaactgtttcaaaaactcgataatgacggaag cggaaatatcaactttgacgaatttctagacgccgtcaggggaacactaaacacccgtcgacagcaggcagtggaaaaag cgtttggaaagatggacgccacaggtgacggcgtgattaccatagaggacatacgtaagncgaattttggctgtatctaa |
|
Protein
| Protein ID | pfu_aug1.0_1784.1_08117.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1784.1_08117.t1 MIVLYFTGISSWTYTMAFFGNDDEQNRQTYHQRMESTSNPIEKLRYACLKRGASGIKGLGRIFRIMDKDRSHTLSKDELK NGLQKYGINLDDQTMQELFQKLDNDGSGNINFDEFLDAVRGTLNTRRQQAVEKAFGKMDATGDGVITIEDIRKXNFGCI |
|