Gene
| Gene Model ID | pfu_aug1.0_17855.1_11076 |
|---|---|
| Locus | scaffold17855.1 : 1 ... 12052 : + |
| To GenomeBrowser | scaffold17855.1:1..12052 |
| Genes list of scaffold | scaffold17855.1 |
| Synonym | pfu_aug2.0_107.1_23460 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_17855.1_11076.t1 | 2 | 1 | PTCB-BRCT | 519 | 566 | 1.8e-07 | 30.8 | 3.3e-07 | 0.0024 | 17.6 |
| pfu_aug1.0_17855.1_11076.t1 | 2 | 1 | BRCT | 520 | 567 | 2.5e-13 | 49.9 | 7.0e-11 | 5.2e-07 | 29.7 |
| pfu_aug1.0_17855.1_11076.t1 | 2 | 2 | BRCT | 607 | 680 | 2.5e-13 | 49.9 | 6.1e-07 | 0.0045 | 17.1 |
| pfu_aug1.0_17855.1_11076.t1 | 2 | 2 | PTCB-BRCT | 614 | 678 | 1.8e-07 | 30.8 | 4.5e-05 | 0.34 | 10.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_17855.1_11076.t1 | gi|326674752|ref|XP_003200196.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_17855.1_11076.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17855.1_11076.t1 ggaggaaagaagggtagaaacaaagtaaaaatagaagatgttactccagacgatgccactcagatatttgatgatcctac actgtcagtagaaagcacaccaaaacaagcaaaaggaggaaggaggaataagggtaaagaaaaacaagctaaggaattag aggcaacccaagtctttgatgatcctacacttgctgttgatgatgtaatacagcttcagtctgaagcagaaacaaaaaaa atggatgagcaagatgcaacacaagtgtttgataatgctacagtagcaatagctgacatggacatgggtactaagcctgg agaagaagctacacaggtgttcactgatcagacggtggctctttctgataatactgaatctctaccaggcacctccacct tcactccaacaaatgtgaataatgatgagacgcagagttttggtgaggatgtaaatgacagtgaacatgctggtataaaa tctgaccaagggccaatagtagccgatgagtcaaagcccaaaggaaaaacaaggggtagaaaatcaaaggtaactgaaaa atctgaagaagacaacaacaaaaaggaaacttctcagaaagctgaaatagatcaaggaactactcaaaatccacatggta ctagagggcgtggaagaaaggcagcaaaaaccacagctgaggtgaaggactcggcttcagatacatcacaagtagaggta cctaaaggtagaagagggagaggtaggaaaagtgaagctgcatcaactagtgccacagtgaacaatgaaactaatattgc tgatgatgagtgtacccctcctctagataatgataatgaagaggaggaagtagaggacatacagacatcacctccgaggc atggtaagaaaagggggcggtcctcaacctcagctactactacagctccagtagggagaggcaaaagggcaaagactgag gataaaaaggaggaagtgcaaacttctactgagaacaacagtgaaaccagaggcaggcgaggaagaaagacagcagataa aggggaatctgtcgaagaggatgtgaaggctgccacagccaagaagggaaaaaccagaaaaacaccagagtctccaaaaa agaatgaagtattagaggctactcaaccatacatagatggcagcactgtgccggaggctacacagatatacgatatggaa ataaatgacgaaccagaggcaacacaagcatatgcaatggacgtacaagatgaggacagtgatatgacacccccggtaag tgatgtactgggtgtacccgtggtggagggagaaccaatacgacctatacccatggacagtgatgaggttgttccaccaa gccacagcagtgaggattctaatcttagaagtcctttagtacccataccatctcgatctccatataagtcggcactagct agtcctaaaaaggagaagaaaagtccctcaccaaagagggtcatgtttgctaaagtaagagcagtaaatcccagtaaact tatagtcatgttcacaggggtgatggatgaacaaggacaaaagattgtaaaggacctgggtggagagttagtgacttcaa tgtctgactgtacacatctagtcacagataaggtacggaggacggtgaagtttctttgttgtttgtcaaggggaatcccc atagtgacacctacatggttgaatagtagcaaatctgcagcaatgttcatagatgccactcccttcctggtgaaagaccc ggctacagagaagcagtacaggttcagtctccagacgtctatagataaagccagggaatcttcccttcttcagggctaca aaatacacgttactaaatctgtcagacctgaacctgcacagatgaaagatatagttctgagtgccggagctgagttttta gctacaatacccaagaaatccaatgataaaacagtggtgatatcttgtcaagatgaccgcacagtatgtgaaccagcact taaggcaggcattcccattgttaatgctgaatttattctcaccggaattctcagacaggaagtggatcttagttcatatc ctttgcttaatagtttcttaatgtacatgtatatgtag |
|
Protein
| Protein ID | pfu_aug1.0_17855.1_11076.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17855.1_11076.t1 GGKKGRNKVKIEDVTPDDATQIFDDPTLSVESTPKQAKGGRRNKGKEKQAKELEATQVFDDPTLAVDDVIQLQSEAETKK MDEQDATQVFDNATVAIADMDMGTKPGEEATQVFTDQTVALSDNTESLPGTSTFTPTNVNNDETQSFGEDVNDSEHAGIK SDQGPIVADESKPKGKTRGRKSKVTEKSEEDNNKKETSQKAEIDQGTTQNPHGTRGRGRKAAKTTAEVKDSASDTSQVEV PKGRRGRGRKSEAASTSATVNNETNIADDECTPPLDNDNEEEEVEDIQTSPPRHGKKRGRSSTSATTTAPVGRGKRAKTE DKKEEVQTSTENNSETRGRRGRKTADKGESVEEDVKAATAKKGKTRKTPESPKKNEVLEATQPYIDGSTVPEATQIYDME INDEPEATQAYAMDVQDEDSDMTPPVSDVLGVPVVEGEPIRPIPMDSDEVVPPSHSSEDSNLRSPLVPIPSRSPYKSALA SPKKEKKSPSPKRVMFAKVRAVNPSKLIVMFTGVMDEQGQKIVKDLGGELVTSMSDCTHLVTDKVRRTVKFLCCLSRGIP IVTPTWLNSSKSAAMFIDATPFLVKDPATEKQYRFSLQTSIDKARESSLLQGYKIHVTKSVRPEPAQMKDIVLSAGAEFL ATIPKKSNDKTVVISCQDDRTVCEPALKAGIPIVNAEFILTGILRQEVDLSSYPLLNSFLMYMYM |
|