Gene
| Gene Model ID | pfu_aug1.0_17881.1_32863 |
|---|---|
| Locus | scaffold17881.1 : 4526 ... 10944 : + |
| To GenomeBrowser | scaffold17881.1:4526..10944 |
| Genes list of scaffold | scaffold17881.1 |
| Synonym | pfu_aug2.0_355.1_17324 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_17881.1_32863.t1 | 1 | 1 | Methyltransf_22 | 4 | 151 | 5.5e-24 | 85.0 | 8.2e-28 | 6.1e-24 | 84.8 |
| pfu_aug1.0_17881.1_32863.t1 | 1 | 1 | Methyltransf_21 | 25 | 115 | 4.6e-06 | 26.6 | 2.4e-09 | 1.8e-05 | 24.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_17881.1_32863.t1 | gi|321461906|gb|EFX72933.1| | hypothetical protein DAPPUDRAFT_325714 [Daphnia pulex] | 4.0e-22 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_17881.1_32863.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17881.1_32863.t1 atgtaccacgggattaattttgatttcagttttgatgacgcaatagttaaaaagtatggttgtgaagttcattcctttga tccaagcatgaggagaccagatcataaacacggtaaaaatgtgatgttccacgcatctggcttgtccaaagacaatcaac cctccaggggcaaattatggaagatgagaaccctcaaacaattccttggagagcttggtcacttgaatagaacaatagat gtgctgaaaattgatattgaagaatgggagtggttagctttaccggaaatgatcaaatcaggagtcatgtcgcaggtccg acaatttgacgtggagctacatataacactgaagacagaacctaacaaaaataaatattttcttggacttagtattctca aagatctatatgatatcggattcaggatcttttggactcatcgtaacttatattgtaaattcaattcaagagtgggatct gtggctagatctggctgtcacgaggtctctttcatcaatgtaaatttcaaacccaagtcatga |
|
Protein
| Protein ID | pfu_aug1.0_17881.1_32863.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_17881.1_32863.t1 MYHGINFDFSFDDAIVKKYGCEVHSFDPSMRRPDHKHGKNVMFHASGLSKDNQPSRGKLWKMRTLKQFLGELGHLNRTID VLKIDIEEWEWLALPEMIKSGVMSQVRQFDVELHITLKTEPNKNKYFLGLSILKDLYDIGFRIFWTHRNLYCKFNSRVGS VARSGCHEVSFINVNFKPKS |
|