Gene
| Gene Model ID | pfu_aug1.0_1789.1_29865 |
|---|---|
| Locus | scaffold1789.1 : 4318 ... 20855 : - |
| To GenomeBrowser | scaffold1789.1:4318..20855 |
| Genes list of scaffold | scaffold1789.1 |
| Synonym | pfu_aug2.0_383.1_10718 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1789.1_29865.t1 | 1 | 1 | Herpes_teg_N | 251 | 404 | 4.1e-11 | 42.5 | 5.5e-14 | 9.1e-11 | 41.4 |
| pfu_aug1.0_1789.1_29865.t1 | 1 | 1 | OTU | 537 | 630 | 1.2e-13 | 51.7 | 7.2e-17 | 1.2e-13 | 51.7 |
| pfu_aug1.0_1789.1_29865.t1 | 1 | 1 | Helitron_like_N | 1302 | 1502 | 6.5e-36 | 123.7 | 3.9e-39 | 6.5e-36 | 123.7 |
| pfu_aug1.0_1789.1_29865.t1 | 2 | 1 | PIF1 | 1743 | 1924 | 1.8e-31 | 109.4 | 7.1e-29 | 1.2e-25 | 90.2 |
| pfu_aug1.0_1789.1_29865.t1 | 1 | 1 | AAA_30 | 1750 | 1950 | 5.0e-10 | 39.2 | 8.7e-13 | 1.4e-09 | 37.7 |
| pfu_aug1.0_1789.1_29865.t1 | 2 | 2 | PIF1 | 1959 | 2053 | 1.8e-31 | 109.4 | 1.5e-08 | 2.4e-05 | 23.4 |
Transcript
| Transcript ID | pfu_aug1.0_1789.1_29865.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1789.1_29865.t1 atgcgcagaaaagcaaatcgaagaagaaaagtcagctatagacaaaatactgacagcaatattgaagtaccaactgctat gacattaccagagcaacaaaacaaaggaaacaactcttctttgagaatgtcattgcagcagcagattgagaatcaaactt cttccaatggaaagaatttacccaaacaaaacattgaaaacaatgcctctgtgggactggcacctcctagagaggaaatt tccctggccgctcggaggttggcctctccttgtgagaaaacgcctctaaacgcccgggggttggcacctccctcgggaag ccgtctgagtgctacagatgttagcatgccaccgagccctgataccccagcgtgggtatgtaccccagcgcgggtaccct cgccaaagcgcggcgttgcaggtcagacgcaaactgggatgagagctcatttcatggcagtggaatgtagacccagtata attgaatcattgagaaaagatgcaaagaatattgaaacgaatactgaactgaactgtgaaacgaaccatgaaacgaatac tgaattgaactatggaacggatactacactggactatgaaactactactaaaccgaacaatggaactattttgcattcat tgcggtctttgccctcctattccatttcaaaagatctaagcaaaacaagaaaaaaggatagaaacgtaagcaaaaagcaa tgttctaatattacaaaggctatacaaggaagcatgcatcagggtagctacacgtttggtgaaaatgcaggcaatcaatg tgttccaatttgtttaatagcagggatttttcttactacgaagcctgtacatgtatggacttcagaagatatggacaata ttcttatgactgggaatgagctatattcatttctgagagcaagttcactcatgaatcataaccacttattggtacatgaa ctacctagacagattgaagttttctatacattttacaacattcacatcgatgaatctaaagtctccatgatatcgtctgt agaaaatcttaatcaagatctaaccaactttaatgctttgcctttagatgaggcaatacaactgtcattagaaaaatacc ctacagcatttgtttgctttgcaggcaacactatgctcataggtagaacagatttcggggttttcatctttgattctcat tcacggtctgagacaggaatgatcgatatcgatggtaaaagcacatgcttgcttatgacagatttaaaacatataagcga acgaatacatgccctaggagaatcaatgaatatatctggtgcaatcatgattgaaattactgggttcaaagttgaaaatg tgcattcctctagtgataaacatgaatcaaatgtacaacttcgctctcaaagagaaaatatcttagatgacgatgatgct gtaaagttttcattcaaggaagcacctatcaaacctgacttcaaattactttgcaaggggacacaaaaacaaatatgctc tactcatgatctgaagtacgaaaataataaagtacacggcaacaagctgattaaaaatgctgaagagccaaagacatggc acagaataaaaggcgatgggaattgcttctttcgagctctgtcatttgcactaagtaacacagaagagaatcatgtaaaa cttagagaacttgtctgtgaacacgcatcatcacaaccagatgtgtttactccaatattaagagtaggacatgagtcagt attatcttatttagaaacgacaaagatgagagaggattgtgtttgggctacagaattcgagatatttgtggcatctggta tgttagactgtaccatttacacctttaacaatgatacttggactaagtttgcaatgccttcagagaataaaagaaatata tctgataaaaataagatattcttggaccatgtcaatagtagtcactatgatgttgtcttgtctacaggatctgaaacggc gaaagataaaaataattcaaataggtttcaaggtctcagagaaatgcaacgaaagagaaaagacaccaaagaaagagatg tcctgagaaaacgcctgaaaaaacaggaagagttgatagatgaaaataacgataacgttagtggacttgacactccagaa atacatatagtgaaggacaactccgtcgacacaaatgtcgagaactccctcttagataacattcgaaagaactgtaaaag aaagttgcgatatatgaatgatgagacgtaccgtgacacaagaaagaaaatcagcaaacgaacatacgaggagaatgatg cctacaggggaaataagaaatcttcaaacatgaataagtacaaagaaaatatcgaacacagggaaaaactcaaagagaga agtgtcatgaagtacttgcataatgaagaacacaggaagcacgtcaaagaagcaagtgtttcaaaatatagagagaatga ggagcataaggagaaagtaaaattagcaagttttacaaaagcaaacgttagagagaaaagtatttctaaatacaaaaatg acgaagatcacaagcgcaaagttaaaagtgcaagcatttcaaggtattgggaagacggtaacttcagatccaaactgaaa gaacagagtctgaatatgtaccatgataatgaaacttttagaataaatgctaaaagaaaaagcatgttgcaaaatattaa aaatgaaaggcacaagtcacgagcaagacagactgctaaggaaaagtatgcgacggataagaaatatagatctcaaaaac ttgagtgtgcaagaaaaaagtacaaagataataccgaaaggattccagataagagaaaggttttaagtgaaaaaaagaga agtcaaagaatgttacaaagtcgtgaaaattcagatgtacagctgattatagctaactttcaaagtaaagctaaagaagg accagaatttgcttgttcctgttgtaaacggctctgctttgaaaatcaagtagtttcttgctgtttcgaagcatatgcta aaaagggacataatgtcactaaagctgcaacaatgagtataacacacaactctgaaaattcaacaggggaaggacaagat gattgctttaaaatatgtcatacatgtcaacgtaaaatcatgactggatgtacaccaccagaatcctcctcaaatcatat gaaccttgacaaaataccagacgaattgatatcactaaacagtttagaggaaaacttgattgcaaaacacattactttta tgaagcttgcaatgctgccacaagggacacaaaatgctattcaaggaccagttgtctgtgttccttcgaatcttaataaa gcagcaagtttaccaaggcaagaggataatgatctcattctacgagtaaaactgaaacgaaagttaagctacaagggcca ttacgactttaaatttgtgaatacaagtcatgtgtacaatgcgctgcaatatttgaaggaaaataacatatggtacaaag acacagacataaatcaaccggacctagaagaaaataattgtatgtcagtatctacatccaatgaacaaaacgatgaaatc agacacaaagacaatactacaaattgttcaaacattagacctgacaagataccgcacgaggaaaatgagccttcagatga atatggcgttcaatatgatacctgcttacaacctccagatataggacaagaagtgcttgaccattactttgatgaagtat ataatatagcacctgctgagggaatgaatcctataagaatgcttcaagaaaaagggaatgaagccaagtgttttcctgtt ctatttcccactggaaaaaattcctatgatgaggcacgaaacctaccaataacccttagcagatactttaataacaggtt gatgcatgcagataacagatttgcacaaaatacaaattacctcttctacgcccaatatttatctgaactgaaacaggtaa ttgataaaacacaaatttcacttagaaagacagattctaagggaacacctggaggaaacgtaactgcagagacgttacga gacaaggcaaaactgaaacagatgttcagaaaagatgaggcactgcgatttctgcagccaataagagggacaccatccta ttggcagagtgcacaaaaagatttatttgcgatgctgcgacagcttggaattcctacatggttctgttcattctctgcag ctgaattcagatggaaggacatgatcaatgcaatcttaaagcgacaaggagacacaaggaaatttgaaaatcttgaatgg tcagacaaatgccagattcttaaaagcaatcccgtgacagtagcaagaatgttcgaccgtcgttttcacttatttctaca tgaagtgatcttgtccccatgcaaccctattggcaaagttgttgactttttcttacgagttgaatttcaacaaaggggat cacctcatatgcactgccttttttggatagcggacgctccaagattgaatgaaaatgacgaggaaacagtatgcgctttt attgatagatatgtcacttgtgaactgcctcacgaaaaggaccaagaactgcatgacatagttcaaggagtacagcagca tagtaagaagcattcgaagtcatgtcgcaagaaaggaactacatgtcgttttaattttccaagacctccctcctctcgca catgtattatttccccattagaggagaaaactagtaatgcaaagaaaaaagactcaaatacgtcgcagttagaagcaagt agtagaaacaatgaagaaaatgactcttatccaaacgaaaccatgacaaaaacagatgcattgggaattctgaagcgagt ttgggacgccattcagtctgactctgttagcnaagctcttgtagaagcacaagaactctatgatttgattggggaaccaa cggacgcttgggcaatgatttgtcccgagtcggagagatgccgtgatgaatgtagactgatgaaatcattaaatactgca gatgatggtttgtcggaagacatttcggatcttcaacctgatcataaaccggatattacatatacaattcaggggcgaaa tgcatcgaaggaagagattctcccggttttaagatctttaaacagtaaacaaagcgaagttttttacttcacaagggatt ggtgtttgaagaaacttcaaggacaaaatgcagatccttttcatatattcatcacgggaggtgctgggactggaaaaagt catttaatcaaagcaatcaaatatgaagcttcaagaatccttgcaaaagtatgtgaagagccagatcaactaacagtttt gttgacagcttttacggggacagctgcattcaatattcagggttgcactgtccatcatgcatttcgaataactagaggct taccacttccttatgaagctctaaaggaacagacacttagtcctcttcgtgctaaattagagaacttacagatacttgtt attgacgaggtttccatgatatacaaacgacttctctattacatccacgagcgactagtccagattaagagaaacaaaag tccattcggtggagtttctgtgttggctgtaggagacttttttcaacttccacccgtgaaacaaagcaagaatgagagat tatacaatgtcaatacatcctaccctgtagactactggaacgatttcttctccgttatagagctagatgaaataatgaga cagagggaagacattgaatttgccaaagttctgaacatgatgagaacaagaacagatgatgaacatatttcagatacggc acttgagatgttgcgtgaatgtgaacgggaaggcaaaagcgaagatttgcatgtgttttctacgaataaagaagttgact tgcacaatcaagatatgttaaaatacctacagaaggaaattattgaaatacctgctaaggacttcaaaaaggacaaagca tctggaaaaatgaccccactatctgtacctatatcaaagtcagagtcagatggtctgccaactatccttttgatgtcaga ggatgcaagagtaatgcttactagaaacattgatgttcaagacggcctggttaatggaatcatgggaacagttcatcaga taaaggagacaaagtctacagaaaagtctaaatcagacatttctgccgtagtagttttatttgataacaaaaaggttgga aagtctgctggaaaactgtcggagaaaggcaacttggtaacgatagaaagaattgaagaggaattacgaaaatccggaac aaccagatttcagttccctctcaaattatcctgggcatgtaccgctcataaggtacaagggatgacactcgacagagttg ttgttgaccttaaaaaagtattcagtcctgggcaagcatacgtagccctcagtagggtcacatctaaaggaggtttgcat ttgaaaagcagtggcactgtaacgtttgaaaagaagatatttgcagacaaggaagttggagataaaataaaaagtatgaa aaaattctcagtagggaaggttaatctggatgtgagttctggagatctgagtgatcttcgtatgattttgttcaatgtcc aaagacttctctacaatataaagcaaatgaagaccgatcagcggtttcttagtgcagatgctgtaatgcttacagagaca tggcttaaacctgatgatacttgtgatgcagtacaaatagaaagtttcagattttcacatcaatcgagatatgactccta caccaactcatctgatgtcacatctaagttaaaagagtcatcgggcggtggagttggagtttatattaaagaaacatgtc atttggagataaaaacgttacatcatacagacatcgaaggtctggttttgaaagctgaggataagctacagatacttgtt atttatagaccccaagcatatccaatatcacttttcgtagaacgtctttctgatatcatttcaattttgaacaaaaacaa tgaaccgtgtataattctgggagacttcaatgaaaacattcttcaaagcaaaaatggaaaaattcactcgttcatgacca gcagaaactttaggcaagttgtcacttcacctacaacagtgaatgggacgctgttagaccatgtgtatgttactggcaac attgatgttactacaaagatcataccaacatattatagcgaccatgaggcagttcttgtcagtattaaattccaaaatga agttggaaaaatctattaa |
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Protein
| Protein ID | pfu_aug1.0_1789.1_29865.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1789.1_29865.t1 MRRKANRRRKVSYRQNTDSNIEVPTAMTLPEQQNKGNNSSLRMSLQQQIENQTSSNGKNLPKQNIENNASVGLAPPREEI SLAARRLASPCEKTPLNARGLAPPSGSRLSATDVSMPPSPDTPAWVCTPARVPSPKRGVAGQTQTGMRAHFMAVECRPSI IESLRKDAKNIETNTELNCETNHETNTELNYGTDTTLDYETTTKPNNGTILHSLRSLPSYSISKDLSKTRKKDRNVSKKQ CSNITKAIQGSMHQGSYTFGENAGNQCVPICLIAGIFLTTKPVHVWTSEDMDNILMTGNELYSFLRASSLMNHNHLLVHE LPRQIEVFYTFYNIHIDESKVSMISSVENLNQDLTNFNALPLDEAIQLSLEKYPTAFVCFAGNTMLIGRTDFGVFIFDSH SRSETGMIDIDGKSTCLLMTDLKHISERIHALGESMNISGAIMIEITGFKVENVHSSSDKHESNVQLRSQRENILDDDDA VKFSFKEAPIKPDFKLLCKGTQKQICSTHDLKYENNKVHGNKLIKNAEEPKTWHRIKGDGNCFFRALSFALSNTEENHVK LRELVCEHASSQPDVFTPILRVGHESVLSYLETTKMREDCVWATEFEIFVASGMLDCTIYTFNNDTWTKFAMPSENKRNI SDKNKIFLDHVNSSHYDVVLSTGSETAKDKNNSNRFQGLREMQRKRKDTKERDVLRKRLKKQEELIDENNDNVSGLDTPE IHIVKDNSVDTNVENSLLDNIRKNCKRKLRYMNDETYRDTRKKISKRTYEENDAYRGNKKSSNMNKYKENIEHREKLKER SVMKYLHNEEHRKHVKEASVSKYRENEEHKEKVKLASFTKANVREKSISKYKNDEDHKRKVKSASISRYWEDGNFRSKLK EQSLNMYHDNETFRINAKRKSMLQNIKNERHKSRARQTAKEKYATDKKYRSQKLECARKKYKDNTERIPDKRKVLSEKKR SQRMLQSRENSDVQLIIANFQSKAKEGPEFACSCCKRLCFENQVVSCCFEAYAKKGHNVTKAATMSITHNSENSTGEGQD DCFKICHTCQRKIMTGCTPPESSSNHMNLDKIPDELISLNSLEENLIAKHITFMKLAMLPQGTQNAIQGPVVCVPSNLNK AASLPRQEDNDLILRVKLKRKLSYKGHYDFKFVNTSHVYNALQYLKENNIWYKDTDINQPDLEENNCMSVSTSNEQNDEI RHKDNTTNCSNIRPDKIPHEENEPSDEYGVQYDTCLQPPDIGQEVLDHYFDEVYNIAPAEGMNPIRMLQEKGNEAKCFPV LFPTGKNSYDEARNLPITLSRYFNNRLMHADNRFAQNTNYLFYAQYLSELKQVIDKTQISLRKTDSKGTPGGNVTAETLR DKAKLKQMFRKDEALRFLQPIRGTPSYWQSAQKDLFAMLRQLGIPTWFCSFSAAEFRWKDMINAILKRQGDTRKFENLEW SDKCQILKSNPVTVARMFDRRFHLFLHEVILSPCNPIGKVVDFFLRVEFQQRGSPHMHCLFWIADAPRLNENDEETVCAF IDRYVTCELPHEKDQELHDIVQGVQQHSKKHSKSCRKKGTTCRFNFPRPPSSRTCIISPLEEKTSNAKKKDSNTSQLEAS SRNNEENDSYPNETMTKTDALGILKRVWDAIQSDSVSXALVEAQELYDLIGEPTDAWAMICPESERCRDECRLMKSLNTA DDGLSEDISDLQPDHKPDITYTIQGRNASKEEILPVLRSLNSKQSEVFYFTRDWCLKKLQGQNADPFHIFITGGAGTGKS HLIKAIKYEASRILAKVCEEPDQLTVLLTAFTGTAAFNIQGCTVHHAFRITRGLPLPYEALKEQTLSPLRAKLENLQILV IDEVSMIYKRLLYYIHERLVQIKRNKSPFGGVSVLAVGDFFQLPPVKQSKNERLYNVNTSYPVDYWNDFFSVIELDEIMR QREDIEFAKVLNMMRTRTDDEHISDTALEMLRECEREGKSEDLHVFSTNKEVDLHNQDMLKYLQKEIIEIPAKDFKKDKA SGKMTPLSVPISKSESDGLPTILLMSEDARVMLTRNIDVQDGLVNGIMGTVHQIKETKSTEKSKSDISAVVVLFDNKKVG KSAGKLSEKGNLVTIERIEEELRKSGTTRFQFPLKLSWACTAHKVQGMTLDRVVVDLKKVFSPGQAYVALSRVTSKGGLH LKSSGTVTFEKKIFADKEVGDKIKSMKKFSVGKVNLDVSSGDLSDLRMILFNVQRLLYNIKQMKTDQRFLSADAVMLTET WLKPDDTCDAVQIESFRFSHQSRYDSYTNSSDVTSKLKESSGGGVGVYIKETCHLEIKTLHHTDIEGLVLKAEDKLQILV IYRPQAYPISLFVERLSDIISILNKNNEPCIILGDFNENILQSKNGKIHSFMTSRNFRQVVTSPTTVNGTLLDHVYVTGN IDVTTKIIPTYYSDHEAVLVSIKFQNEVGKIY |
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