Gene
| Gene Model ID | pfu_aug1.0_1790.1_08122 |
|---|---|
| Locus | scaffold1790.1 : 1 ... 20675 : + |
| To GenomeBrowser | scaffold1790.1:1..20675 |
| Genes list of scaffold | scaffold1790.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1790.1_08122.t1 | 2 | 1 | GATase | 6 | 62 | 2.2e-10 | 40.2 | 3.6e-12 | 5.4e-09 | 35.7 |
| pfu_aug1.0_1790.1_08122.t1 | 1 | 1 | QueC | 79 | 171 | 1.9e-06 | 27.2 | 2.6e-09 | 3.8e-06 | 26.3 |
| pfu_aug1.0_1790.1_08122.t1 | 1 | 1 | NAD_synthase | 81 | 140 | 7.3e-07 | 28.3 | 7.1e-10 | 1.0e-06 | 27.8 |
| pfu_aug1.0_1790.1_08122.t1 | 2 | 2 | GATase | 118 | 141 | 2.2e-10 | 40.2 | 0.044 | 66.0 | 2.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1790.1_08122.t1 | gi|351700455|gb|EHB03374.1| | GMP synthase [glutamine-hydrolyzing] [Heterocephalus glaber] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1790.1_08122.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1790.1_08122.t1 ataatgtactgtattttagagcaattatcatatcaggaggtcccagttctgtgtacgctgatgacgcccctcgttacgac ccagaaatcttctcttgtggtattccagtgctgggaatctgctatggattacaggaaatgaatggatcggcaatgacaac atctgtgaatcatataaacggagaaaacactaaagaaaaagttgttattctagatgcaggagctcaatatggaaagatgc tgttgagtggaggtgtggattccacggtctgtgcggctctgttacataaagccttgaggaaggagcaggtgatagctgta catatagacaacggcttcatgagaaaaaacgagagtcataatgtagaacagtcactcagtaaaataggactcagtgttaa agtggtaaaggcagcacatacattctacaatggttcaacatccattactgtagagaatggtgaatctggtcccagaaaac ggaaaacaaatcgtctaaatacgacagtctacccagaggaaaaacgcaagattattggtgacactttcatgaaggtagca aatgaagtagtggaagaactcaatttaaaaccagaagatgtttacctaggtcaagatcagcgagcacgagacgtggtggt tacaagtatctatgctaagacttag |
|
Protein
| Protein ID | pfu_aug1.0_1790.1_08122.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1790.1_08122.t1 NVLYFRAIIISGGPSSVYADDAPRYDPEIFSCGIPVLGICYGLQEMNGSAMTTSVNHINGENTKEKVVILDAGAQYGKML LSGGVDSTVCAALLHKALRKEQVIAVHIDNGFMRKNESHNVEQSLSKIGLSVKVVKAAHTFYNGSTSITVENGESGPRKR KTNRLNTTVYPEEKRKIIGDTFMKVANEVVEELNLKPEDVYLGQDQRARDVVVTSIYAKT |
|