Gene
| Gene Model ID | pfu_aug1.0_1790.1_08123 |
|---|---|
| Locus | scaffold1790.1 : 20701 ... 32675 : - |
| To GenomeBrowser | scaffold1790.1:20701..32675 |
| Genes list of scaffold | scaffold1790.1 |
| Synonym | pfu_aug2.0_6803.1_12897 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1790.1_08123.t1 | 2 | 1 | PQ-loop | 55 | 115 | 3.3e-15 | 55.3 | 2.9e-18 | 4.3e-14 | 51.7 |
| pfu_aug1.0_1790.1_08123.t1 | 2 | 2 | PQ-loop | 119 | 142 | 3.3e-15 | 55.3 | 0.0073 | 110.0 | 2.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1790.1_08123.t1 | gi|320164014|gb|EFW40913.1| | 2.0e-20 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1790.1_08123.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1790.1_08123.t1 atgccgtggcaggtcccactatttttagaacacgaggagaggtcaatagtttttaatcctgtagctgtaccagccagcaa tgtaactgatacaaactgtagtgctggggtacagtttatttataaagtccttggtgactgtgtgacagacaccaagggga ttctctcggatgcgtttggaattgcgtcaattgcattttggataatagtgagtgtgcctcagatggtaaagaactgtagg aatatacgaggtgtagagggagtgtccttaggtctgatactgcagtggaccctgggggacacaaccaacttagtgggcag tattctcacaaaacaactcattttacagatctacctcgccatatattttgtatttgcggatcttgtgctgttctctcagt atattttctatcagatttggaaaagaaaacaccaaaaggatacagaatcaagagaaaaggaacgtagatccccatccaaa cttgtcctgtgttttactggtgctatgttaacattgaacctctttggcatattgcatggccgtccttcaactttgatcaa gctctcaactgaacaagaagtgcacatatcccatcatgccgctggaaggaatctgctctccacagggaagctgggacata tacaagtcttcaatgttggtatttttaaagatcgaattaagaaaaaaagtagaaataattgtcaggactgtcgttag |
|
Protein
| Protein ID | pfu_aug1.0_1790.1_08123.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1790.1_08123.t1 MPWQVPLFLEHEERSIVFNPVAVPASNVTDTNCSAGVQFIYKVLGDCVTDTKGILSDAFGIASIAFWIIVSVPQMVKNCR NIRGVEGVSLGLILQWTLGDTTNLVGSILTKQLILQIYLAIYFVFADLVLFSQYIFYQIWKRKHQKDTESREKERRSPSK LVLCFTGAMLTLNLFGILHGRPSTLIKLSTEQEVHISHHAAGRNLLSTGKLGHIQVFNVGIFKDRIKKKSRNNCQDCR |
|