Gene
| Gene Model ID | pfu_aug1.0_1792.1_37115 |
|---|---|
| Locus | scaffold1792.1 : 1 ... 19734 : + |
| To GenomeBrowser | scaffold1792.1:1..19734 |
| Genes list of scaffold | scaffold1792.1 |
| Synonym | pfu_aug2.0_105.1_16924 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1792.1_37115.t1 | 3 | 1 | TIR_2 | 185 | 282 | 3.4e-09 | 36.7 | 2.6e-12 | 3.8e-08 | 33.3 |
| pfu_aug1.0_1792.1_37115.t1 | 3 | 2 | TIR_2 | 335 | 346 | 3.4e-09 | 36.7 | 0.16 | 2400.0 | -1.3 |
| pfu_aug1.0_1792.1_37115.t1 | 3 | 3 | TIR_2 | 365 | 382 | 3.4e-09 | 36.7 | 0.55 | 8200.0 | -3.0 |
Transcript
| Transcript ID | pfu_aug1.0_1792.1_37115.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1792.1_37115.t1 ggtatagacaagttgaaggcagatctgtacacagtgactttggaccaagattacatgggagagaaaatacctctggcctg gctcgattttgagaagtctattatagcaactcggcaaaaaggaaatgatgtgattgactacaacataatagagaagaaag cagctgactgtggcattgtagacaaaacagaggtcgcccaagctttacagttcctgcacgatcttggagctgtccaacat ttcaacaatcattaccttaagtctcgagtggtcatcaatccacagtggattgtggatgtcatggcatgtgttgtgtcagt gaaggaatctcatataaagggaggaagggatcctcacctgtttaatgccagtacagtacgacgtgccgtggaactgaagg ctccgttcttacaatgcctcaagttctttcataccatcatggtaactgacatgcaagctttcatgcctcctgatacaaac aatgattacgatgttcatatggctaaaaccatgtctgggttacaggagatgaaaaaatccctggcaacagacattttcat atcttactgtgagaaagatgctccgaaagacaggtcaaaggtcattcacccggcaacagttcatgatgaccttacaaacc atggttacacatgttggtaccctgagtccagtagtaagtattcctctgatgcgctagctcgggctttgatagattcctca gtgttcctggtatttatgtcccctaattatgccaaggatacacagtgctgtgacattttccagtacgccaagctgacgct aggaaaaccgttcattgtggttgctgttggtgatgacttctcgtggcagaaaagtaaaataggaatatttctccaagatg tggtgtttgtaaacatgatcaactccaagaaggctgtgtacaaggacaaactgaatgaattactgcagaaacttgataac atcgctaacacggcaatgttaagtcatgatagacctgaatgctttgttagctatgcttggagtaactcacaacaggcctg taataagggaaccaaatatagagagggtgcactgggagatgctgatcctagagaacttaaggaattcattgaggaggagg gaaaactcaggtgctggattgacatagaacgagtcggaatggttggtatgatggcatttaacctgccacaggtcagcttc cagatgaaatctgaaggatccaaagatgaactcttaaaactaatcaatgaaaagatgctaccggaaaaggccaaagacaa agatggccgacaacaggaccgcagtaaatcggagcagaatcagatctcattccaggaattgtatgagcttgcacagagga agttcctacgacaggtggggcactatgcagcatcacatgagatgcttccataccccaggctgtttgttgtggatattgtt aaaaaggaggaaatacagggcagtaatattgacaaattcactttgatagagacaagtttggagaaggaaggaggaaaaga tgaggacaaagaagcagaggaggatagagagaaagaagaaatgataaggaagatgggtaacttcagacacagagattact gcgtgtatactctctgtgaatacgatgagggttggcacagtgtggaagacccgtttcttctgccggaggattttggtcgt aattctctggaggactatgccccttatctggcaagaatcaccgctataatgaagcataacaaggacctagtgctgaactg tctgtcagaccccgttggcaaagattacgttaaatggctacatgagtatgacgtcacagaagcgaagaacaaagggaagc atgacgtcatacgcaaaacgtgcgctaaagcttgtaacgtgcaaatttacgtaggaatacattttgaagtatgtcaaatg tcacttgtgtttactggagatttcatgaacatgtatcagaacttaagaaatgaagtctacaatctggatgaagataagaa aatgtcttctctatcacgatgtcgtttgccgagtggtaagataaaatggctgtgttccaaacattgtaaagagatgaaag ccacagttctgagtgatgacatcatcaacaaagaccctacctctggtaccgcggcgggactggatcacatgatagaatac ctgagaactctagatgctgacactctacagaaaaaattcaccaactctgaccgggcaaaaaggactctggaagctgcctc caaaagaatgtccagtttgccattcggtttaccattcaagtctcgaccatccaaactgaaaactcgagcgagtcagcaca acatgatggcaagcatcagtatagaggaatcagacaagaacagcgtatcagctcagaataatcaaaataacgtacctgct gcggtcattactaaatcagctcagcgtgacagacaagtcagtaacatcagcagagacttggtgcagacagacagacagac agaaccaaaactagagaaacagtataatacgattgagatgtcacaacccaaacaaagtaaacccaagacgtccagtaaaa catgtgtgctgatgtaa |
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Protein
| Protein ID | pfu_aug1.0_1792.1_37115.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1792.1_37115.t1 GIDKLKADLYTVTLDQDYMGEKIPLAWLDFEKSIIATRQKGNDVIDYNIIEKKAADCGIVDKTEVAQALQFLHDLGAVQH FNNHYLKSRVVINPQWIVDVMACVVSVKESHIKGGRDPHLFNASTVRRAVELKAPFLQCLKFFHTIMVTDMQAFMPPDTN NDYDVHMAKTMSGLQEMKKSLATDIFISYCEKDAPKDRSKVIHPATVHDDLTNHGYTCWYPESSSKYSSDALARALIDSS VFLVFMSPNYAKDTQCCDIFQYAKLTLGKPFIVVAVGDDFSWQKSKIGIFLQDVVFVNMINSKKAVYKDKLNELLQKLDN IANTAMLSHDRPECFVSYAWSNSQQACNKGTKYREGALGDADPRELKEFIEEEGKLRCWIDIERVGMVGMMAFNLPQVSF QMKSEGSKDELLKLINEKMLPEKAKDKDGRQQDRSKSEQNQISFQELYELAQRKFLRQVGHYAASHEMLPYPRLFVVDIV KKEEIQGSNIDKFTLIETSLEKEGGKDEDKEAEEDREKEEMIRKMGNFRHRDYCVYTLCEYDEGWHSVEDPFLLPEDFGR NSLEDYAPYLARITAIMKHNKDLVLNCLSDPVGKDYVKWLHEYDVTEAKNKGKHDVIRKTCAKACNVQIYVGIHFEVCQM SLVFTGDFMNMYQNLRNEVYNLDEDKKMSSLSRCRLPSGKIKWLCSKHCKEMKATVLSDDIINKDPTSGTAAGLDHMIEY LRTLDADTLQKKFTNSDRAKRTLEAASKRMSSLPFGLPFKSRPSKLKTRASQHNMMASISIEESDKNSVSAQNNQNNVPA AVITKSAQRDRQVSNISRDLVQTDRQTEPKLEKQYNTIEMSQPKQSKPKTSSKTCVLM |
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